Table 1. Assembly information for strains analyzed.
The N50 for the strains sequenced in this study is for unscaffolded contigs. Several of the previously sequenced assembled genomes are scaffolded, however, increasing the N50 for these genomes.
| Strain | Gene Num. | Num. Contigs | Size (bp) | N50 |
|---|---|---|---|---|
| Pph1448a | 5454 | 3 | 6112448 | Complete |
| PsyB728a | 5254 | 1 | 6093698 | Complete |
| PtoDC3000 | 5661 | 3 | 6538260 | Complete |
| PtoMax13 | 5525 | 349 | 6105073 | 62407 |
| PtoNCPPB1108 | 5482 | 304 | 6082048 | 47802 |
| Pmp | 5327 | 969 | 6039297 | 15161 |
| Pla107 | 6248 | 791 | 6759945 | 22550 |
| Pmo | 5693 | 3414 | 6392728 | 5634 |
| Pja | 5674 | 4661 | 6380619 | 4021 |
| PpiR6 | 5872 | 5099 | 6520586 | 3003 |
| Pma | 5474 | 878 | 6221751 | 17222 |
| Psa | 5245 | 941 | 5849032 | 14086 |
| Pla106 | 5293 | 798 | 5895184 | 15738 |
| Ptt | 5262 | 3776 | 6243278 | 4753 |
| Pac | 5498 | 1179 | 6183769 | 12409 |
| Pta | 5541 | 1613 | 6158837 | 16098 |
| PgyB076 | 5652 | 104 | 6236653 | 202511 |
| PgyR4 | 5355 | 108 | 5905212 | 3723 |
| Pae | 5308 | 915 | 5960467 | 16806 |
| T1 | 5587 | 122 | 6145942 | 150139 |
| K40 | 5557 | 582 | 6153658 | 26013 |
| Por1-6 | 5290 | 2855 | 6704257 | 10037 |
| DM2.1.12.02a | 5180 | 157 | 5914114 | 88439 |
| LMC.P10 | 5226 | 172 | 6238204 | 83072 |
| LMC.P80 | 5136 | 137 | 6189597 | 120774 |
| LMC.P91 | 5374 | 243 | 6324900 | 59429 |
| KN2.a.3 | 5201 | 133 | 5804868 | 120373 |
| Knox623a | 5391 | 554 | 5946364 | 22175 |
| Knox652c | 5071 | 160 | 5905380 | 95163 |
| NL.P123 | 5030 | 220 | 5855665 | 61758 |
| NP29.1a | 5088 | 208 | 6088841 | 76982 |
| LP217a | 5242 | 382 | 6224113 | 47360 |
| LP221b | 4967 | 122 | 5939644 | 95628 |
| LP868.1a | 5153 | 123 | 5907756 | 111176 |
| RM.P66 | 5290 | 70 | 7081112 | 284403 |
| RMX.24.a.1 | 5367 | 224 | 6271973 | 69103 |
| RM.P20 | 5153 | 159 | 6229891 | 99197 |
| RMX815.1a | 5077 | 167 | 5565846 | 67363 |
| ME812.2b | 4888 | 334 | 5636659 | 56761 |
| LP205a | 4964 | 478 | 5698429 | 30345 |