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. Author manuscript; available in PMC: 2018 Sep 15.
Published in final edited form as: Cancer. 2017 May 23;123(18):3617–3627. doi: 10.1002/cncr.30707

Table 4.

Methylation levels in Selected Genes and RCC recurrence Risk

Discovery Set Validation Set

RCC patients (n=63) RCC patients (n=177)

Marker Recurrence
n(%)
No Recurrence
n(%)
HR*(95%CI) p value Recurrence
n(%)
No Recurrence
n(%)
HR*(95%CI) p value
NPY
Low 7(22.58) 24(77.42) 1(ref) 17(19.32) 71(80.68) 1(ref)
High 8(25.00) 24(75.00) 0.94(0.31–2.80) 0.91 14(15.73) 75(84.27) 1.16(0.53–2.54) 0.71
LEP
Low 2(6.25) 30(93.75) 1(ref) 11(12.36) 78(87.64) 1(ref)
High 13(41.94) 18(58.06) 5.14(1.07–24.66) 0.04 20(22.73) 68(77.27) 1.48(0.66–3.32) 0.34
LEPR
Low 3(9.38) 29(90.63) 1(ref) 8(9.09) 80(90.91) 1(ref)
High 12(38.71) 19(61.29) 1.02(0.14–7.71) 0.98 23(25.84) 66(74.16) 3.15(1.23–8.07) 0.02

ccRCC patients (n=48) ccRCC patients (n=143)

NPY
Low 7(29.17) 17(70.83) 1(ref) 14(19.72) 57(80.28) 1(ref)
High 6(25.00) 18(75.00) 1.70(0.39–7.40) 0.48 10(13.89) 62(86.11) 1.05(0.42–2.62) 0.91
LEP
Low 2(8.33) 22(91.67) 1(ref) 9(12.50) 63(87.50) 1(ref)
High 11(45.83) 13(54.17) 5.96(1.02–34.76) 0.05 15(21.13) 56(78.87) 1.41(0.58–3.42) 0.44
LEPR
Low 2(8.33) 22(91.67) 1(ref) 6(8.33) 66(91.67) 1(ref)
High 11(45.83) 13(54.17) 1.59(0.22–11.59) 0.65 18(25.35) 53(74.65) 6.00(1.92–18.82) 2.00E-03

HR* Multivariate regression model adjusted by age, gender, stage, grade, smoking status, BMI, hypertension and histology