Table 1. HDA6 Interacting Proteins Involved in Chromatin Remodeling and Histone Modifications Identified by LC-MS/MS.
| AGI Code | Coverage | Unique Peptides | Description |
|---|---|---|---|
| AT5G63110ab | 47% | 16 | HDA6 |
| AT5G22650a | 30.07% | 5 | HD2B |
| AT5G08450ab | 26% | 8 | HDC1, histone deacetylase complex 1 |
| AT1G64490a | 8.87% | 1 | DEK, chromatin associated protein |
| AT1G20696a | 8.84% | 1 | HMGB3, high mobility group B3 protein |
| AT3G44750a | 8.16% | 2 | HD2A |
| AT2G35160ab | 5.16% | 3 | SUVH5, histone methyltransferase (MTase) |
| AT5G05330a | 5% | 1 | HMG-box (high mobility group) DNA binding family protein |
| AT2G19520b | 3.75% | 1 | MSI4/FVE |
| AT3G22590a | 3.37% | 1 | PHP, a homolog of human Paf1 Complex subunit Parafibromin |
| AT1G24190b | 3.08% | 2 | SNL3 |
| AT5G67430a | 2.59% | 1 | GCN5-related N-acetyltransferase (GNAT) family protein |
| AT5G35600a | 2.2% | 1 | HDA7 |
| AT3G01320b | 2.11% | 2 | SNL1 |
| AT5G67320a | 1.96% | 1 | HOS15, histone deacetylation-related WD-40 repeat protein |
| AT5G58230a | 1.89% | 1 | MSI1, histone binding protein |
| AT5G53430a | 0.86% | 1 | SDG29/ATX5, histone-lysine N-methyltransferase |
| AT5G49160a | 0.85% | 2 | MET1 |
| AT4G34430a | 0.71% | 1 | SWI/SNF complex subunit SWI3D |
| AT4G15180a | 0.3% | 1 | SDG2/ATXR3, putative histone-lysine N-methyltransferase |
Unique peptides coverage (%) is indicated in the “Coverage” column.
a
Identified from pro35S:HDA6-GFP transgenic plants.
b
Identified from proHDA6:HDA6-GFP transgenic plants.
a,b
Identified from both pro35S:HDA6-GFP and proHDA6:HDA6-GFP transgenic plants.