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. 2017 Sep 8;12(9):e0184528. doi: 10.1371/journal.pone.0184528

Table 1. Hop transcriptome assembly metrics of Illumina paired end reads.

Number of contigs 162,889
Number of contigs including scaffolded regions 150,443
N50 contigs 743 bp
N50 contigs including scaffolded region 984 bp
Maximum length contigs 23,284 bp
Maximum length scaffolds 23,284 bp
Average length contigs 452 bp
Average length scaffolds 494 bp
Total length contigs 73,699,989 bp
Total length including scaffolded regions 74,308,957 bp
Total reads used in assembly 343,559,950
Matched reads 295,962,373 (86.1% of all)
Not matched reads 47,597,577 (13.9% of all)
Reads in pairs 245,947,392 (83.1% of all)
Maximum coverage 345,180X
Average coverage 145X
Coverage SD ±1918X