Table 1.
List of Identified Genes with Clustering de Novo Missense Mutations
| Gene name | Transcript ID | # de novo missense | Median distance (bp) | p value | Adj. p value |
|---|---|---|---|---|---|
| ACTL6Ba | ENST00000160382 | 3 | 0 | 5.70E-07 | 1.10E-02 |
| ALG13 | ENST00000394780 | 3 | 0 | 1.50E-07 | 2.89E-03 |
| CDK13 | ENST00000181839 | 12 | 273 | <1.00E-08 | <1.93E-04 |
| COL4A3BP | ENST00000380494 | 6 | 18 | 2.60E-07 | 5.01E-03 |
| GABBR2a | ENST00000259455 | 3 | 0 | 9.00E-08 | 1.74E-03 |
| GRIN2B | ENST00000609686 | 11 | 354 | 1.57E-06 | 3.03E-02 |
| KCNH1 | ENST00000271751 | 7 | 65 | 1.00E-07 | 1.93E-03 |
| KCNQ2 | ENST00000354587 | 20 | 301 | 5.00E-08 | 9.64E-04 |
| KIF5C | ENST00000435030 | 3 | 0 | 1.40E-07 | 2.70E-03 |
| PACS1 | ENST00000320580 | 9 | 0 | <1.00E-08 | <1.93E-04 |
| PACS2a | ENST00000458164 | 3 | 0 | 1.50E-07 | 2.89E-03 |
| PCGF2 | ENST00000360797 | 3 | 0 | 1.11E-06 | 2.14E-02 |
| PPP2R1A | ENST00000322088 | 4 | 5 | 4.60E-07 | 8.87E-03 |
| PPP2R5D | ENST00000485511 | 16 | 10 | <1.00E-08 | <1.93E-04 |
| SMAD4 | ENST00000398417 | 4 | 6 | 1.60E-07 | 3.08E-03 |
P values are based on a permutation test (N = 1.00E+08). Adj. p values are corrected by Bonferroni correction. The three identified genes that have not yet been implicated in ID/DD are indicated by an a.