Table 3.
DEPs mapped to pathways (top20).
| # | Pathway | Diff proteins with pathway annotation (429) | All Proteins with pathway annotation (3046) | P value | Pathway ID |
|---|---|---|---|---|---|
| 1 | Oxidative phosphorylation | 28 (6.53%) | 84 (2.76%) | 4.595368e-06 | ko00190 |
| 2 | Glutathione metabolism | 19 (4.43%) | 46 (1.51%) | 4.790152e-06 | ko00480 |
| 3 | Phagosome | 18 (4.2%) | 45 (1.48%) | 1.465223e-05 | ko04145 |
| 4 | Other types of O-glycan biosynthesis | 3 (0.7%) | 3 (0.1%) | 0.002776944 | ko00514 |
| 5 | Proteasome | 12 (2.8%) | 39 (1.28%) | 0.005547541 | ko03050 |
| 6 | Ribosome | 34 (7.93%) | 179 (5.88%) | 0.03682623 | ko03010 |
| 7 | SNARE interactions in vesicular transport | 4 (0.93%) | 10 (0.33%) | 0.04048394 | ko04130 |
| 8 | Pentose phosphate pathway | 8 (1.86%) | 30 (0.98%) | 0.05031079 | ko00030 |
| 9 | Photosynthesis - antenna proteins | 8 (1.86%) | 31 (1.02%) | 0.05982023 | ko00196 |
| 10 | Brassinosteroid biosynthesis | 3 (0.7%) | 8 (0.26%) | 0.09012274 | ko00905 |
| 11 | alpha-Linolenic acid metabolism | 4 (0.93%) | 13 (0.43%) | 0.0979834 | ko00592 |
| 12 | Carbon fixation in photosynthetic organisms | 16 (3.73%) | 83 (2.72%) | 0.1139435 | ko00710 |
| 13 | Arachidonic acid metabolism | 4 (0.93%) | 14 (0.46%) | 0.1226120 | ko00590 |
| 14 | Purine metabolism | 14 (3.26%) | 72 (2.36%) | 0.1264869 | ko00230 |
| 15 | Taurine and hypotaurine metabolism | 1 (0.23%) | 1 (0.03%) | 0.1408404 | ko00430 |
| 16 | Synthesis and degradation of ketone bodies | 1 (0.23%) | 1 (0.03%) | 0.1408404 | ko00072 |
| 17 | Linoleic acid metabolism | 2 (0.47%) | 5 (0.16%) | 0.1480381 | ko00591 |
| 18 | Diterpenoid biosynthesis | 2 (0.47%) | 5 (0.16%) | 0.1480381 | ko00904 |
| 19 | C5-Branched dibasic acid metabolism | 2 (0.47%) | 5 (0.16%) | 0.1480381 | ko00660 |
| 20 | Porphyrin and chlorophyll metabolism | 9 (2.1%) | 47 (1.54%) | 0.2078737 | ko00860 |