Table 1. Structurally characterized AdoMet-dependent MTases.
Enzyme |
Source organism |
Target atom |
Enzyme E.C. no. |
PDB |
Reference |
DNA MTases | |||||
M.HhaI | Haemophilus haemolyticus | Cytosine-C5 | 2.1.1.73 | 2hmy | 91 |
M.HaeIII | Haemophilus aegyptius | Cytosine-C5 | 2.1.1.73 | 1dct | 64 |
M.PvuII | Proteus vulgaris | Cytosine-N4 | 2.1.1.113 | 1boo | 43 |
M.DpnII | Streptococcus pneumoniae | Adenine-N6 | 2.1.1.72 | 2dpm | 46 |
M.RsrI | Rhodobacter sphaeroides | Adenine-N6 | 2.1.1.72 | 1eg2 | 44 |
M.TaqI | Thermus aquaticus | Adenine-N6 | 2.1.2.72 | 2adm | 97,119 |
DNMT2 | Human | Cytosine-C5 (?) | 2.1.1.37 (?) | 1g55 | 120 |
Protein MTases | |||||
CheR | Salmonella typhimurium | Glutamate-O | 2.1.1.80 | 1af7,1bc5 | 121,122 |
PRMT3 | Rat | Arginine-N | 2.1.1.125 | 1f3l | 25 |
Hmt1 | Saccharomyces cerevisiae | Arginine-N | 2.1.1.125 | 1g6q | 38 |
PIMT | Thermus maritima | Isoaspartate-O | 2.1.1.77 | 1dl5 | 26 |
RNA MTases | |||||
VP39 | Vaccinia orthopox virus | mRNA nucleoside-2′-O | 2.1.1.57 | 1v39 | 123–126 |
ErmAM | S.pneumoniae | rRNA adenine-N6 | 2.1.1.48 | 1yub | 127 |
ErmC′ | Bacillus subtilis | rRNA adenine-N6 | 2.1.1.48 | 2erc | 128,129 |
Fibrillarin homolog | M.jannaschii | rRNA nucleoside-2′-O (?) | 2.1.1.66 (?) | 1fbn | 29 |
FTSJ | E.coli | RNA | 2.1.1.? | 1eiz,1ej0 | 130 |
Small molecule MTases | |||||
COMT | Rat | Catechol-O | 2.1.1.6 | 1vid | 131 |
GNMT | Rat | Glycine-N | 2.1.1.20 | 1xva,1d2c | 132,133 |
ChOMT | Medicago sativa L | Chalcone-O | 2.1.1.? | 1fpq, 1fp1 | 134 |
IOMT | Medicago sativa L | Isoflavone-O | 2.1.1.? | 1fpx, 1fp2 | 134 |
Other MTases | |||||
Mj0882 | M.jannaschii | ? | ? | 1dus | 31 |
HI0319 | H.influenzae | Small molecule (?) | ? | 1im8 | 32 |
HI0766 | H.influenzae | tRNA (?) | 2.1.1.34 (?) | 1j85 | 32 |