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. 2017 Sep 7;10:416. doi: 10.1186/s13071-017-2352-9

Table 2.

Sequence identity matrix between the eight R. sanguineus (s.l.) haplotypes detected in the study

haplotype 1a haplotype 2a haplotype 3a haplotype 4a haplotype 5a haplotype 6b haplotype 7b haplotype 8b
haplotype 1
haplotype 2 0.982
haplotype 3 0.997 0.979
haplotype 4 0.984 0.997 0.982
haplotype 5 0.994 0.977 0.997 0.979
haplotype 6 0.745 0.742 0.745 0.745 0.742
haplotype 7 0.747 0.745 0.747 0.747 0.745 0.997
haplotype 8 0.750 0.747 0.75 0.75 0.747 0.995 0.997

a R. sanguineus (s.l.) haplotypes of the “Temperate” lineage

b R. sanguineus (s.l.) haplotypes of the “Tropical” lineage