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. 2017 Sep 7;5:e3788. doi: 10.7717/peerj.3788

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©2017 Moller and Liang

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

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(A) Total number of CRISPR spacers detected in real AMD and EBPR metagenomes using four different detection methods—Crass (de novo), MetaCRAST (using assembly-guided queries), MetaCRAST (using taxonomy-guided queries), and MinCED (de novo). Taxonomy-guided and assembly-guided queries are provided as Tables S3–S4 and S6–S7. (B) Comparison of spacers detected in the real AMD metagenome using Crass (de novo), MetaCRAST (using taxonomy-guided queries), MetaCRAST (using assembly-guided queries), and MinCED (de novo). Comparison was performed using Venny 2.1 (http://bioinfogp.cnb.csic.es/tools/venny/). (C) Comparison of spacers detected in the real EBPR metagenome using the same methods as in (B) Comparison was performed using Venny 2.1.