Table 2.

ChIP primer sequences

Primer sequences used for ChIP on ROREs are found on the promoters of STRA6, CRBP1, and LRAT. Locations of the RORE are denoted as distance from the start site of the gene base pair distal to the A of the ATG defined as −1.

Gene	RORE	Species	5′–3′ sequence
STRA6	−1651	Human	Fwd, GGCAAAACTTCCCCTAGGTC
			Rev, TGTACCCCAGACTCCAACAC
STRA6	−3214	Human	Fwd, TTGCCTTGGAGGGGCTAAAG
			Rev, TCTCAGGGGTTTGTGCCTTC
CRBP1	+241	Human	Fwd, CAACTGGCTCCAGTCACTCC
			Rev, GCGCAGGTACTCCTCGAAAT
CRBP1	−64	Human	Fwd, TCCGGTCTCCTCTTCCTTTGT
			Rev, GGATGTCGAAGGGTCAGGTTT
LRAT	−609	Human	Fwd, CACCGAAGACTACCGCGAAG
			Rev, CCGGTTGCACTACTGGCTTT
GAPDH	+3555	Human	Fwd, TTGCCCTCAACGACCACTTT
			Rev, TCAGGGCCCTTTTTCTGAGC
Stra6	−339	Mouse	Fwd, GCGGGCAGTTTGCACAAGAG
			Rev, AGAGTGTTCTGCACCCCTGG
Stra6	−2244	Mouse	Fwd, GCTGAGTGTCTGTGACCCTT
			Rev, ATCCAGTCTGGCAAAACCACT
Crbp1	−1162	Mouse	Fwd, CACAGGCTCCTAGGCTCTGA
			Rev, CGTGGCTTCTGATCCTTGTT
Crbp1	−2142	Mouse	Fwd, AGGAGATGGCCAAAGTGG
			Rev, ACAGAGGTTGCTCCAGGT
Lrat	−3218	Mouse	Fwd, CTGAGTGTGGGCTTCCTTGA
			Rev, GAAAAGTTGGACCCCAAGTCA
Lrat	−4060	Mouse	Fwd, ATCTGAGCTCTGGAGCAGAC
			Rev, CCTTTGACCTGAGTTTCTCATGC
Stra6	−890	Mouse	Fwd, AGCTCCTCTGGGAGGATAGG
			Rev, AAGATGGATGGCTGCTGACC