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. 2017 Jul 17;7(9):3047–3058. doi: 10.1534/g3.117.043083

Table 1. Genome characteristics for the scaled quail (Callipepla squamata) v1.0, bobwhite (Colinus virginianus) v2.0, and bobwhite 1.1 (accession: AWGT01000000) genome assemblies.

Genome Characteristicsa Scaled Quail 1.0 Bobwhite 2.0 Bobwhite 1.1b
Total scaffold length 1,045,281,893 bp 1,254,146,751 bp 1,095,702,334 bp
Scaffold length excluding gaps (N’s) 1,016,929,532 bp 1,134,249,133 bp 971,740,276 bp
Total scaffolds 34,302 42,369 65,748
N50 scaffold size 1,035,259 bp 2,042,136 bp 49,503 bp
Largest scaffold 4,990,493 bp 14,292,544 bp 600,658 bp
Average coverage 292× 122× 77×
Scaffolds capturing 90% total length 1313 8990 25,837
a

Scaffolds shorter than 1 kb are excluded from the assemblies.

b

First-generation scaffolded bobwhite assembly (Halley et al. 2014).