Table 2. BUSCO single-copy vertebrate ortholog detection summary for the scaled quail (Callipepla squamata) v1.0, bobwhite (Colinus virginianus) v2.0, chicken (Gallus gallus) 4.0, chicken 5.0, zebra finch (Taeniopygia guttata) 3.2.4, and turkey (Meleagris gallopavo) 5.0 genome assemblies.
Scaled Quail 1.0 | Bobwhite 2.0 | Chicken 4.0 | Chicken 5.0 | Zebra Finch 3.2.4 | Turkey 5.0 | |
---|---|---|---|---|---|---|
Complete single-copy BUSCOs | 2565 (84.8%) | 2494 (82.5%) | 2547 (84.3%) | 2593 (85.8%) | 2299 (76.1%) | 2241 (74.1%) |
Complete duplicated BUSCOs | 45 (1.5%) | 48 (1.6%) | 30 (1.0%) | 62 (2.1%) | 73 (2.4%) | 18 (0.6%) |
Fragmented BUSCOs | 156 (5.2%) | 176 (5.8%) | 178 (5.9%) | 155 (5.1%) | 244 (8.1%) | 303 (10.0%) |
Missing BUSCOs | 257 (8.5%) | 305 (10.1%) | 268 (8.9%) | 213 (7.0%) | 407 (13.5%) | 461 (15.2%) |
Total BUSCO groups searched | 3023 | 3023 | 3023 | 3023 | 3023 | 3023 |