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. 2017 Sep 12;15:24. doi: 10.1186/s12959-017-0143-3

Table 3.

Pathogenicity score of missense mutations

Missense Mutations Polyphen- 2 Provean MUpro SNP&GO Sift
Score prediction Score prediction SVM score Protein structure stability Score Prediction Score Prediction
p.Pro302Ala 0.028 Benign −4.257 Deleterious −0.797 Decrease stability (0.4) Neutral 0.00 Benign
p.Thr 305 Ala 0.00 Benign −0.387 Neutral 0.134 Increase stability (0.05) Neutral 0.00 Benign
p.Thr331Ala 0.025 Benign −1.100 Neutral 0.122 Increase stability (0.03) Neutral 0.00 Benign
p.Thr331Ala 0.025 Benign −1.100 Neutral 0.122 Increase stability (0.03) Neutral 0.00 Benign
p.Ser325Gly 0.014 Benign −2.331 Neutral −0.063 Decrease stability (0.1) Neutral 0.00 Benign
p.Trp 432Arg 1.00 Damaging −12.18 Deleterious −0.411 Decrease stability (0.8) Disease Na Na

Pathogenecity of missense mutations was calculated by five different softwares to check for the protein structure stability and deleterious effects. Na not available