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. 2017 Sep 12;7:11252. doi: 10.1038/s41598-017-11206-z

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Bd21 lncRNAs associated with transposable elements (TE) and tandem repeats (TR). (a) TE and lncRNAs: Y axis is lncRNA length in nucleotides, X axis is TE families. DNA Class II: Helitron (DHH) [7]; Hat (DTA) [5]; CACTA (DTC) [60]; PIF/Harbinger (DTH) [11]; Mutator (DTM) [5]; Tc1/Mariner (DTT) [3]. TE Class I: LINE (RIX) [36], Ty1/copia (RLC) [105], Ty3/gypsy (RLG) [198], Unclassified LTR (RLX) [36]. Round brackets indicate TE code based on the classification system proposed by Wicker et al.⁴². Square brackets show number of lncRNA loci associated with TEs. (b) TR and lncRNAs: Y axis shows number of lncRNAs, X axis shows types of tandem repeats according to the classification by monomer length into: micro (microsatellites: monomer length 2-9); mini (minisatellites: monomer length 10–99), sat (satellites: monomer length >=100); vntr (variable number tandem repeats: homopolymeric stretches and mixed types).