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. 2017 Sep 12;7:11252. doi: 10.1038/s41598-017-11206-z

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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LncRNAs expression profiles in Bd lines. (a) Boxplot of lncRNAs expression in Bd21, Bd21-3 and Bd1-1. Expression values are shown as Log2 of RPKM (Reads Per Kilobase per Million mapped reads). LncRNAs not expressed (RPKM = 0) were excluded. (b) The Shannon entropy distribution of Bd21 and Bd21-3 lncRNAs. The black line corresponds to Bd21 lncRNAs and the dot line to Bd21-3 lncRNAs. (c,d) Hierarchical clustering (Ward method) of Bd21 lncRNAs (c) and Bd21-3 lncRNAs (d) expression profiles. LncRNAs expression levels were scaled to Z score. Blue indicates high expression level, red low expression. (e,f) Boxplots displaying abundance of specific lncRNAs in Bd21 (e) and Bd21-3 (f). RPKM expression values are shown as log2 and black dots correspond to individual lncRNA. Parenchyma tissue is not shown in the Bd21-3 boxplot.