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. 2017 Sep 12;7:11402. doi: 10.1038/s41598-017-11035-0

Figure 4.

Figure 4

SmMIP-based targeted RNAseq reveals decreased expression levels in SKRC7-VHL cells of glycolysis related genes a.o. SLC2A1, CA9, HK2 and LDHA in two independent duplicate experiments (a,b). Relative values were comparable to those obtained from whole transcriptome RNAseq analysis (c), which is in agreement with the correlation shown in Fig. 3. Differences in expression levels were validated on the protein level for HK2 and CA9, using tubulin as house keeping control (Fig. 4d). Gene transcript levels of hypoxia inducible genes are very high in surgically obtained clear cell renal cell cancer samples, relative to peritumorally obtained normal kidney tissue (e, *p = 0.01; **p < 0.003, ***p < 0.0003, Students’ T-test) (Fig. 4e).