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. 2016 Nov 19;3(4):31. doi: 10.3390/bioengineering3040031

Table 1.

The 13 amino acid indices (selected from a total of 531 indices) used for characterization of tripeptides.

Index Number Description Reference
1 Isoelectric Point [22]
2 Normalized van der Waals Volume [23]
3 Alpha-Helix Indices for Beta-Proteins [24]
4 Beta-Strand Indices for Beta-Proteins [24]
5 Side-Chain Contribution To Protein Stability [25]
6 The Stability Scale from the Knowledge-Based Atom–Atom Potential [26]
7 Hydropathy Index [27]
8 Normalized Frequency of Turn [28]
9 Free Energy in Beta-Strand Region [29]
10 Free Energy in Alpha-Helical Region [29]
11 Polarity [30]
12 Side Chain Interaction Parameter [31]
13 Amino Acid Distribution [32]