Table 1:
Parameter | De novo assembly |
---|---|
Total transcripts | 34 423 |
Annotated transcripts with nr NCBI | 19 713 |
Annotated transcripts with GO term | 16 992 |
Minimum transcript size (nt) | 100 |
Medium transcript size (nt) | 605 |
Mean transcript size (nt) | 1034 |
Largest transcript (nt) | 26 010 |
N50 | 6240 |
N50 size (nt) | 1673 |
Total assembled bases (Mb) | 35.6 |