Table 1. The MADS-box transcription factors identified in pears.
Gene name | Gene ID | Chr locus | Genomic position | Protein length (aa) | K domain (Y/N) | EST hits (Y/N) | Type |
---|---|---|---|---|---|---|---|
PbrMADS1 | Pbr035643.1 | 13 | 5802860–5807937 | 240 | Y | Y | MIKCc |
PbrMADS2 | Pbr015153.1 | 16 | 5932222–5938012 | 251 | Y | Y | MIKCc |
PbrMADS3 | Pbr016601.1 | 17 | 17647798–17647986 | 63 | N | Y | MIKCc |
PbrMADS4 | Pbr022183.1 | 9 | 18587853–18588041 | 63 | N | Y | MIKCc |
PbrMADS5 | Pbr023545.1 | 6 | 21412278–21417880 | 240 | Y | Y | MIKCc |
PbrMADS6 | Pbr029989.1 | 13 | 4385598–4392040 | 307 | Y | Y | MIKCc |
PbrMADS7 | Pbr020185.1 | 6 | 4424778–4429823 | 249 | Y | Y | MIKCc |
PbrMADS8 | Pbr020186.1 | 6 | 4405924–4406359 | 74 | N | Y | MIKCc |
PbrMADS9 | Pbr018801.2 | 2 | 603223–614105 | 668 | Y | Y | MIKCc |
PbrMADS10 | Pbr008076.1 | sffold1479.0 | 33652–33879 | 76 | N | Y | MIKCc |
PbrMADS11 | Pbr016599.2 | 17 | 17667140–17673579 | 222 | Y | Y | MIKCc |
PbrMADS12 | Pbr007180.1 | 14 | 15043269–15048861 | 256 | Y | Y | MIKCc |
PbrMADS13 | Pbr029990.1 | 13 | 4377373–4381393 | 240 | Y | Y | MIKCc |
PbrMADS14 | Pbr036879.1 | 14 | 13999288–14002989 | 224 | Y | Y | MIKCc |
PbrMADS15 | Pbr037444.1 | 6 | 18929–21076 | 170 | Y | Y | MIKCc |
PbrMADS16 | Pbr017715.1 | 6 | 437472–439619 | 200 | Y | Y | MIKCc |
PbrMADS17 | Pbr039900.1 | sffold867.0 | 119095–119372 | 63 | N | Y | MIKCc |
PbrMADS18 | Pbr001551.1 | 6 | 14880923–14887496 | 138 | N | Y | MIKCc |
PbrMADS19 | Pbr039897.1 | sffold867.0 | 76730–76921 | 64 | N | Y | MIKCc |
PbrMADS20 | Pbr001458.1 | sffold1032.0 | 108284–109564 | 117 | N | Y | MIKCc |
PbrMADS21 | Pbr001460.1 | sffold1032.0 | 121179–122459 | 117 | N | Y | MIKCc |
PbrMADS22 | Pbr013902.1 | 7 | 12939336–12970807 | 239 | Y | Y | MIKCc |
PbrMADS23 | Pbr032788.1 | 1 | 8123761–8132448 | 236 | Y | Y | MIKCc |
PbrMADS24 | Pbr032787.2 | 1 | 8143132–8159638 | 254 | Y | Y | MIKCc |
PbrMADS25 | Pbr001457.1 | sffold1032.0 | 93002–97487 | 239 | Y | Y | MIKCc |
PbrMADS26 | Pbr022146.1 | 15 | 19423131–19425153 | 241 | Y | Y | MIKCc |
PbrMADS27 | Pbr040541.1 | 2 | 15725115–15727317 | 235 | Y | Y | MIKCc |
PbrMADS28 | Pbr035294.1 | 8 | 7359228–7362459 | 216 | Y | Y | MIKCc |
PbrMADS29 | Pbr029686.2 | 9 | 13855887–13862738 | 243 | Y | Y | MIKCc |
PbrMADS30 | Pbr039503.1 | 10 | 7101939–7110441 | 244 | Y | Y | MIKCc |
PbrMADS31 | Pbr000556.1 | 5 | 24521775–24530180 | 246 | Y | Y | MIKCc |
PbrMADS32 | Pbr004239.1 | 8 | 5533059–5533244 | 62 | N | Y | MIKCc |
PbrMADS33 | Pbr000828.1 | 15 | 40714549–40721545 | 225 | Y | Y | MIKCc |
PbrMADS34 | Pbr002033.1 | 14 | 7643260–7648572 | 267 | Y | Y | MIKCc |
PbrMADS35 | Pbr025860.1 | 3 | 2235923–2242424 | 323 | Y | Y | MIKCc |
PbrMADS36 | Pbr009670.1 | 7 | 1511095–1515332 | 258 | Y | Y | MIKCc |
PbrMADS37 | Pbr022918.2 | 2 | 7101509–7106026 | 258 | Y | Y | MIKCc |
PbrMADS38 | Pbr040108.1 | sffold872.0 | 38975–39447 | 90 | N | N | MIKCc |
PbrMADS39 | Pbr007029.1 | 5 | 989690–989920 | 77 | N | N | MIKCc |
PbrMADS40 | Pbr036758.1 | 5 | 5383182–5383400 | 73 | N | N | MIKCc |
PbrMADS41 | Pbr007915.1 | 7 | 8282013–8282231 | 73 | N | N | MIKCc |
PbrMADS42 | Pbr007481.1 | 15 | 38293055–38293246 | 64 | N | N | MIKCc |
PbrMADS43 | Pbr019340.1 | 8 | 967796–978558 | 234 | Y | Y | MIKCc |
PbrMADS44 | Pbr038022.1 | 15 | 38658322–38668704 | 123 | N | Y | MIKCc |
PbrMADS45 | Pbr029333.1 | sffold491.0 | 141754–142664 | 81 | N | Y | MIKCc |
PbrMADS46 | Pbr019339.1 | 8 | 938405–938686 | 94 | N | Y | MIKCc |
PbrMADS47 | Pbr003650.1 | 13 | 10532036–10535566 | 225 | Y | Y | MIKCc |
PbrMADS48 | Pbr039693.1 | 15 | 26890960–26894582 | 225 | Y | Y | MIKCc |
PbrMADS49 | Pbr021448.1 | 10 | 2035089–2037780 | 260 | Y | Y | MIKCc |
PbrMADS50 | Pbr004234.1 | 8 | 5488881–5495600 | 203 | Y | N | MIKCc |
PbrMADS51 | Pbr000804.1 | 15 | 40943666–40950346 | 189 | Y | N | MIKCc |
PbrMADS52 | Pbr042160.2 | 15 | 33038074–33044155 | 348 | N | Y | MIKC* |
PbrMADS53 | Pbr022012.1 | 8 | 12737277–12740508 | 303 | N | Y | MIKC* |
PbrMADS54 | Pbr007292.1 | 14 | 15821857–15830381 | 809 | N | Y | MIKC* |
PbrMADS55 | Pbr011423.3 | 6 | 1824609–1827345 | 375 | N | Y | MIKC* |
PbrMADS56 | Pbr039074.1 | 13 | 2703781–2707742 | 438 | N | Y | MIKC* |
PbrMADS57 | Pbr025656.1 | 10 | 16499696–16500379 | 228 | N | N | Mα |
PbrMADS58 | Pbr034610.1 | 5 | 7051644–7052366 | 241 | N | N | Mα |
PbrMADS59 | Pbr039562.1 | 10 | 6671771–6672298 | 176 | N | N | Mα |
PbrMADS60 | Pbr025657.1 | 10 | 16496114–16496827 | 238 | N | N | Mα |
PbrMADS61 | Pbr039561.1 | 10 | 6674815–6675441 | 209 | N | N | Mα |
PbrMADS62 | Pbr018829.1 | 2 | 237735–238322 | 196 | N | N | Mα |
PbrMADS63 | Pbr025970.1 | sffold417.0 | 29167–29871 | 235 | N | N | Mα |
PbrMADS64 | Pbr025981.1 | sffold417.0 | 377815–378519 | 235 | N | N | Mα |
PbrMADS65 | Pbr029054.1 | 9 | 8250784–8251095 | 104 | N | Y | Mα |
PbrMADS66 | Pbr027548.1 | 9 | 10296082–10296783 | 234 | N | N | Mα |
PbrMADS67 | Pbr033409.1 | 17 | 13872712–13873416 | 235 | N | N | Mα |
PbrMADS68 | Pbr033418.1 | 17 | 13722980–13723684 | 235 | N | N | Mα |
PbrMADS69 | Pbr031473.1 | 3 | 9785284–9786327 | 348 | N | Y | Mα |
PbrMADS70 | Pbr001328.1 | 12 | 18235312–18235986 | 225 | N | N | Mα |
PbrMADS71 | Pbr003216.1 | sffold1135.0 | 13074–14075 | 334 | N | N | Mβ |
PbrMADS72 | Pbr026551.1 | 8 | 4050787–4051728 | 314 | N | N | Mβ |
PbrMADS73 | Pbr022939.1 | 2 | 6904265–6904744 | 160 | N | N | Mβ |
PbrMADS74 | Pbr037101.1 | 17 | 4143639–4144730 | 364 | N | N | Mβ |
PbrMADS75 | Pbr032195.1 | 8 | 6410894–6411958 | 355 | N | N | Mβ |
PbrMADS76 | Pbr004263.1 | 8 | 5777631–5778242 | 204 | N | Y | Mβ |
PbrMADS77 | Pbr031262.1 | 15 | 39184380–39185214 | 106 | N | N | Mβ |
PbrMADS78 | Pbr009640.1 | sffold160.2 | 126297–127616 | 440 | N | N | Mγ |
PbrMADS79 | Pbr030435.1 | 10 | 15484934–15485575 | 214 | N | N | Mγ |
PbrMADS80 | Pbr010321.1 | 14 | 1878629–1879402 | 258 | N | N | Mγ |
PbrMADS81 | Pbr004617.1 | sffold1211.0 | 68578–68904 | 109 | N | N | Mγ |
PbrMADS82 | Pbr036986.1 | sffold740.0 | 65837–66163 | 109 | N | N | Mγ |
PbrMADS83 | Pbr036992.1 | sffold740.0 | 145135–145461 | 109 | N | N | Mγ |
PbrMADS84 | Pbr006795.1 | 6 | 18621477–18621950 | 109 | N | N | Mγ |
PbrMADS85 | Pbr006798.1 | 6 | 18614500–18615171 | 224 | N | N | Mγ |
PbrMADS86 | Pbr006794.1 | 6 | 18630739–18631368 | 210 | N | N | Mγ |
PbrMADS87 | Pbr019318.1 | 8 | 641097–641864 | 256 | N | N | Mγ |
PbrMADS88 | Pbr008912.1 | sffold1558.0 | 8984–9301 | 106 | N | N | Mγ |
PbrMADS89 | Pbr005990.1 | 16 | 10121071–10121748 | 226 | N | N | Mγ |
PbrMADS90 | Pbr026074.1 | 12 | 3872966–3873643 | 226 | N | N | Mγ |
PbrMADS91 | Pbr006693.1 | 4 | 2422773–2423276 | 168 | N | N | Mγ |
PbrMADS92 | Pbr005991.1 | 16 | 10125235–10125795 | 187 | N | Y | Mγ |
PbrMADS93 | Pbr026073.1 | 12 | 3868978–3869538 | 187 | N | Y | Mγ |
PbrMADS94 | Pbr026075.1 | 12 | 3878308–3878949 | 214 | N | Y | Mγ |
PbrMADS95 | Pbr005989.1 | 16 | 10115643–10116284 | 214 | N | Y | Mγ |