Table 1. Oligonucleotide primers and probes used for qRT-PCR to quantify gene expression levels of mx, tnfα, ifnγ, t-bet and nitr9.
Gene | Oligonucleotide sequences (5’–3’) | GenBank Accession No. |
---|---|---|
arp | Fwd:CTGCAAAGATGCCCAGGGA | NM_131580 |
Rev:TTGGAGCCGACATTGTCTGC | ||
Probe:[6~FAM]TTCTGAAAATCATCCAACTGCTGGATGACTACC [BHQ1a~ Q] [47] | ||
mx | Fwd:GCATCATTAGTTCAGACAGTCG | NM_182942.4 |
Rev:AAATTATCGATAGTGTCGATACAAG | ||
Probe:[6~FAM]TGCTGACTGAACGTGTAACTCAACT [BHQ1a~ Q] * | ||
tnfα | Fwd:TCGCATTTCACAAGGCAATTT | NM_212859 |
Rev:GGCCTGGTCCTGGTCATCTC | ||
Probe:[6~FAM]AGGCTGCCATCCATTTAACAGG[BHQ1a~Q] [47] | ||
ifnγ | Fwd:CTTTCCAGGCAAGAGTGCAGA | NM_212864 |
Rev:TCAGCTCAAACAAAGCCTTTCG | ||
Probe:[6~FAM]AACGCTATGGGCGATCAAGGAAAACGAC[BHQ1a~ Q] [47] | ||
t-bet | Fwd:GATCAAGCTCTCTCTGTGATAG | NM_001170599.1 |
Rev:GCTAAAGTCACACAGGTCT | ||
Probe:[6~FAM]TTCTGAAGGTCACGGTCACA[BHQ1a~Q] * | ||
nitr9 | Fwd:GTCAAAGGGACAAGGCTGATAGTT | AY570237.1 |
Rev:GTTCAAAACAGTGCATGTAAGACTCA | ||
Probe: [6~FAM]CAAGGTTTGGAAAAGCAC[BHQ1a~Q] [48] |
Housekeeping gene arp (house-keeping gene) was used as a reference gene.
* The mx and t-bet primers and probes were designed by Beacon Design software (BioRad) and Primer3 plus (GraphPad) software, respectively.