Table 1.
General features of the genomes of Leu. mesenteroides strains and the type strains of closely related taxa used in this study§.
| Strain name in GenBank (accession no.) | Genome statusa (No. of contigs) | Total size (Mb) | G + C content (%) | No. of genes | No. of pseudogenes | Isolation source | Completeness (%)b | Contamination (%)b |
|---|---|---|---|---|---|---|---|---|
| Leu. mesenteroides ssp. jonggajibkimchii DRC1506T (CP014611–14) | C (4) | 1.98 | 37.72 | 1,957 | 140 | Kimchi | 97.04 | 0.76 |
| Leu. mesenteroides KFRI-MG (CP000574) | C (1) | 1.90 | 37.70 | 1,884 | 23 | Kimchi | 96.78 | 0.40 |
| Leu. mesenteroides P45 (JRGZ00000000) | D (6) | 1.87 | 37.50 | 1,837 | 59 | Pulque | 92.93 | 2.07 |
| Leu. mesenteroides Wikim17 (BBPK00000000) | D (41) | 1.86 | 37.80 | 1,844 | 62 | Kimchi | 97.98 | 0.64 |
| Leu. mesenteroides 406 (BCMP00000000) | D (69) | 2.00 | 37.70 | 2,018 | 82 | Airag | 98.55 | 1.16 |
| Leu. mesenteroides GL1 (LMXE00000000) | D (24) | 1.82 | 38.10 | 1,717 | 41 | Unknown | 96.82 | 0.87 |
| Leu. mesenteroides 213M0 (BCMO00000000) | D (58) | 2.03 | 37.70 | 2,031 | 74 | Airag | 99.39 | 1.74 |
| Leu. mesenteroides ssp. mesenteroides ATCC 8293T (CP000414–15) | C (2) | 2.08 | 37.66 | 2,061 | 30 | Fermenting olives | 99.50 | 0.11 |
| Leu. mesenteroides ssp. mesenteroides J18 (CP003101–05) | C (5) | 2.02 | 37.68 | 1,981 | 31 | Kimchi | 99.50 | 0.18 |
| Leu. mesenteroides ssp. mesenteroides DRC0211 (CP013016–17, CP014602-4) | C (5) | 2.02 | 37.80 | 2,082 | 55 | Kimchi | 99.50 | 1.15 |
| Leu. mesenteroides ssp. mesenteroides BD3749 (CP014610) | C (1) | 1.99 | 37.80 | 1,982 | 24 | Unknown | 98.60 | 2.07 |
| Leu. mesenteroides ssp. mesenteroides LbE16 (LAYU00000000) | D (85) | 2.04 | 37.50 | 2,097 | 123 | Italian soft cheese | 97.91 | 6.79 |
| Leu. mesenteroides ssp. dextranicum DSM 20484T (CP012009–10) | C (2) | 1.85 | 38.04 | 1,876 | 95 | Cheese | 96.67 | 3.10 |
| Leu. mesenteroides ssp. dextranicum LbE15 (LAYN00000000) | D (63) | 2.01 | 37.60 | 2,045 | 103 | Italian soft cheese | 97.69 | 4.26 |
| Leu. mesenteroides ssp. cremoris ATCC 19254T (ACKV01000000) | D (126) | 1.74 | 38.50 | 1,702 | 178 | Hansen’s dried cheese | 96.37 | 0.11 |
| Leu. mesenteroides ssp. cremoris TIFN8 (ATAZ00000000) | D (173) | 1.71 | 38.20 | 1,844 | 513 | Dairy starter cultures | 91.00 | 0.78 |
| Leu. mesenteroides ssp. cremoris LbT16 (LAYV00000000) | D (65) | 1.91 | 37.80 | 1,937 | 183 | Italian soft cheese | 97.48 | 2.19 |
| Leu. mesenteroides ssp. cremoris T26 (JAUJ00000000) | D (130) | 1.83 | 38.40 | 1,930 | 242 | Undefined cheese | 94.77 | 4.48 |
| Leu. suionicum DSM 20241T (CP015247–48) | C (2) | 2.05 | 37.60 | 2,034 | 55 | Unknown | 97.44 | 2.57 |
| Leu. pseudomesenteroides KCTC 3652T (AEOQ00000000) | D (1160) | 3.24 | 38.30 | 3,785 | 1,245 | Cane juice |
§The genome analysis was carried out using the NCBI prokaryotic genome annotation pipeline (http://www.ncbi.nlm.nih.gov/genome/annotation_prok/).
aGenome status: D, draft genome sequence; C, complete genome sequence.
bDetermined by CheckM.