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. 2017 Sep 14;7:11529. doi: 10.1038/s41598-017-11064-9

Table 3.

Top eight 3-way SNP-combinations with p-values from G-test less than 1e-11 (the last three columns respectively are the p-value of G-test, p-value of chi-square and the prediction accuracy of SVM (Support Vector Machine)).

SNP1 SNP2 SNP3 3-way SNP combination
name chromo p-value name chromo p-value name chrom p-value G-test Chi-sq SVM
rs380390 1 6.2E-07 rs2421596 2 9.8E-02 rs555174 21 7.9E-04 1.2E-12 0 82.2%
rs3915771 5 7.7E-04 rs1360333 1 9.1E-02 rs380390 1 6.2E-07 3.0E-12 0 74.7%
rs3915771 5 7.7E-04 rs380390 1 6.2E-07 rs2377257 3 8.8E-01 5.7E-12 0 76.7%
rs10515262 5 1.9E-03 rs10501439 11 1.6E-04 rs1363688 5 3.8E-05 7.6E-12 0 77.4%
rs1360333 1 9.1E-02 rs380390 1 6.2E-07 rs1943581 18 2.8E-01 8.0E-12 0 74.7%
rs417637 17 2.2E-03 rs10272438 7 9.7E-06 rs1363688 5 3.8E-05 8.3E-12 0 76.7%
rs10272438 7 9.7E-06 rs10512413 9 2.1E-04 rs1510134 4 7.8E-04 8.6E-12 0 80.1%
rs380390 1 6.2E-07 rs1943581 18 2.8E-01 rs2377257 3 8.8E-01 9.7E-12 0 70.5%