TABLE 1.
Virus | Passage, MOIa | Replicate | Mutation | Mutation location | Presence of: |
|||
---|---|---|---|---|---|---|---|---|
Population consensus sequence | Plaque isolate | Full genome | Insertion only | |||||
PIV5-RSV-F (HN-L) | P11, high MOI | 1 | None | • | • | |||
2 | None | • | • | |||||
3 | None | • | • | |||||
4 | ntb T26 → nt G | Leader | • | • | ||||
P11, low MOI | 1 | A154V | V/P | • | • | |||
1 | T372S | HN | • | • | ||||
1 | V56M | RSV F | • | • | ||||
2 | N306K | P | • | • | ||||
3 | E303K | P | • | • | ||||
3 | P256H | HN | • | • | ||||
P0 (3/23) | 1 | V56M | RSV F | • | • | |||
1 | T174A | RSV F | • | • | ||||
1 | F114S/Y117H | RSV F | • | • | ||||
P11, high MOI (6/23) | 1 | Mixed N569L | RSV F | • | • | |||
1 | Mixed L95L (silent) | RSV F | • | • | ||||
1 | Mixed I76N | RSV F | • | • | ||||
1 | Mixed F572F (silent) | RSV F | • | • | ||||
1 | Mixed K461 stop/mixed F572F (silent) | RSV F | • | • | ||||
PIV5-RSV-G (HN-L) | P11, high MOI | 1 | K78E (mixed) | V/P | • | • | ||
1 | nt 4292C → nt A | 3′ UTR of M | • | • | ||||
2 | K78E | V/P | • | • | ||||
2 | nt 4292C → nt A | 3′ UTR of M | • | • | ||||
3 | K78E | V/P | • | • | ||||
3 | nt 4292C → nt A | 3′ UTR of M | • | • | ||||
4 | K78E | V/P | • | • | ||||
4 | nt 4292C → nt A | 3′ UTR f M | • | • | ||||
P11, low MOI | 1 | L50P | V/P | • | • | |||
1 | T63T (silent) | V/P | • | • | ||||
1 | I85T | V/P | • | • | ||||
1 | L103L (silent) | V/P | • | • | ||||
1 | Y127H | V/P | • | • | ||||
1 | F135P | V/P | • | • | ||||
1 | P152P (silent) | V/P | • | • | ||||
1 | Y175H | V | • | • | ||||
1 | S175S (silent) | P | • | • | ||||
2 | D315N | P | • | • | ||||
2 | T222I | M | • | • | ||||
3 | K78E | V/P | • | • | ||||
3 | S26T | M | • | • | ||||
3 | nt 4292C → nt A | 3′ UTR of M | • | • | ||||
3 | V1667A | L | • | • | ||||
P0 (1/23) | 1 | I243I (silent) | RSV G | • | • | |||
P11, high MOI (0/24) | 1 | None | • | • | ||||
PIV5-RSV-F (SH-HN) | P11, high MOI | 1 | P158L | V/P | • | • | ||
2 | None | • | • | |||||
3 | None | • | • | |||||
P11, low MOI | 1 | P152S | V/P | • | • | |||
1 | N1767D | L | • | • | ||||
2 | nt 136C → nt T | Leader | • | • | ||||
2 | V330F | P | • | • | ||||
2 | S316A | M | • | • | ||||
2 | T1017I | L | • | • | ||||
3 | I169T | M | • | • | ||||
PIV5ΔSH-RSV-F | P11, high MOI | 1 | None | • | • | |||
2 | Q258K | PIV5 F | • | • | ||||
3 | nt 26T → nt G | Leader | • | • | ||||
3 | N1763D | L | • | • | ||||
P11, low MOI | 1 | E303K | P | • | • | |||
2 | R80Q | V/P | • | • | ||||
2 | L1766S | L | • | • | ||||
3 | I169T | M | • | • | ||||
3 | V310V (silent) | M | • | • | ||||
3 | T1462I | L | • | • |
Values in parentheses represent the number of isolates with the mutation/total number of isolates tested.
nt, nucleotide.