Table 2. MLVA diversity within SNP nodes.
| SNP Node | No. Samples | No. MLVA Genotypes | MLVA Resolving Power |
|---|---|---|---|
| d | 10 | 10 | 100% |
| h03 | 17 | 14 | 82% |
| h04 | 1 | 1 | 100% |
| h05 | 17 | 11 | 65% |
| h06 | 1 | 1 | 100% |
| h07 | 25 | 15 | 60% |
| h08 | 6 | 4 | 67% |
| h09 | 3 | 2 | 67% |
| h10 | 2 | 1 | 50% |
| h11 | 18 | 8 | 44% |
| h12 | 5 | 5 | 100% |
| h13 | 1 | 1 | 100% |
| h14 | 1 | 1 | 100% |
| h15 | 1 | 1 | 100% |
| h16 | 3 | 2 | 67% |
| j01 | 9 | 8 | 89% |
| j02 | 14 | 12 | 86% |
| j03 | 36 | 30 | 83% |
| j04 | 1 | 1 | 100% |
| j05 | 8 | 6 | 75% |
| j06 | 1 | 1 | 100% |
| j07 | 16 | 8 | 50% |
| j08 | 4 | 3 | 75% |
| j09 | 5 | 4 | 80% |
| j10 | 2 | 2 | 100% |
| k | 38 | 30 | 79% |
| l01 | 4 | 4 | 100% |
| l02 | 1 | 1 | 100% |
| q04 | 9 | 9 | 100% |
| q05 | 3 | 2 | 67% |
| q06 | 30 | 19 | 63% |
| q08 | 7 | 7 | 100% |
| q09 | 1 | 1 | 100% |
| q10 | 34 | 25 | 74% |
| q11 | 1 | 1 | 100% |
| q12 | 12 | 12 | 100% |
| q13 | 1 | 1 | 100% |
| q14 | 1 | 1 | 100% |
| r | 5 | 4 | 80% |
| s03 | 23 | 21 | 91% |
| s04 | 6 | 6 | 100% |
| s05 | 34 | 15 | 44% |
| s08 | 34 | 14 | 41% |
| s09 | 24 | 11 | 46% |
| s10 | 10 | 9 | 90% |
| s11 | 2 | 2 | 100% |
| s12 | 1 | 1 | 100% |
| s13 | 11 | 10 | 91% |
| s14 | 10 | 10 | 100% |
| s15 | 4 | 3 | 75% |
| s16 | 2 | 1 | 50% |
| s17 | 1 | 1 | 100% |
| s18 | 4 | 4 | 100% |
| s19 | 9 | 7 | 78% |
| s20 | 6 | 5 | 83% |
| s21 | 3 | 3 | 100% |
| s22 | 1 | 1 | 100% |
| t01 | 17 | 15 | 88% |
| t02 | 1 | 1 | 100% |
| t03 | 5 | 5 | 100% |
| t04 | 2 | 2 | 100% |
| t05 | 1 | 1 | 100% |
| t06 | 4 | 4 | 100% |
| t07 | 8 | 8 | 100% |
| t08 | 2 | 2 | 100% |
| t09 | 4 | 4 | 100% |
| t10 | 11 | 9 | 82% |
| t11 | 2 | 2 | 100% |
| u01 | 3 | 3 | 100% |
| u02 | 1 | 1 | 100% |
| u03 | 2 | 2 | 100% |
| v01 | 7 | 4 | 57% |
| v02 | 17 | 15 | 88% |
| v03 | 1 | 1 | 100% |
| v04 | 4 | 4 | 100% |
| v05 | 2 | 2 | 100% |
| v06 | 7 | 6 | 86% |
| v07 | 1 | 1 | 100% |
| v08 | 39 | 36 | 92% |
| v09 | 13 | 10 | 77% |
| v10 | 3 | 2 | 67% |
| v11 | 10 | 7 | 70% |
| v12 | 10 | 9 | 90% |
| v13 | 2 | 1 | 50% |
| w01 | 3 | 3 | 100% |
| w02 | 16 | 10 | 63% |
| x01 | 4 | 4 | 100% |
| x02 | 1 | 1 | 100% |
| x03 | 1 | 1 | 100% |
| y01 | 1 | 1 | 100% |
| y02 | 1 | 1 | 100% |
| y03 | 6 | 5 | 83% |
| y04 | 2 | 2 | 100% |
| y05 | 2 | 2 | 100% |
| z01 | 1 | 1 | 100% |
| z02 | 1 | 1 | 100% |
| z03 | 5 | 5 | 100% |
| z04 | 3 | 2 | 67% |
| z05 | 1 | 1 | 100% |
| z06 | 2 | 1 | 50% |
The number of samples within each SNP defined node in Fig 1A is indicated, along with the number of MLVA genotypes among those samples and the calculated resolving power of MLVA among the samples in each node.