Table 1.
Identification of tumor specific GPC2 transcripts.
| Name | Ensemble Transcript ID | BPs | Exons | Amino Acids (molecular mass) | Predominant isoform? | PredictedSPa | GPI / HS domains |
|---|---|---|---|---|---|---|---|
| GPC2-001 (GPC2) | ENST00000292377.2 | 2532 | 1-10 | 579 (62 kDa) | Neuroblastomas, medulloblastomas, testes | Yes | Yes |
| GPC2-003 | ENST00000471050.1 | 1652 | 4-10 | 325 (34 kDa) | All normal tissues (non-testes) | No | Yes |
| GPC2-005 | ENST00000480087.1 | 767 | 1-2, 4-6 | 134 (14 kDa) | - | Yes | No |
| GPC2-009 | ENST00000482569.1 | 473 | 1-2 | 98 (10 kDa) | - | No | No |
a
Signal peptide (SP) predictions done via SignalP 4.0 and PrediSi located at http://www.cbs.dtu.dk/services/SignalP and http://www.predisi.de/, respectively. BPs, base pairs; GPI, glycosylphosphatidylinositol; HS, heparan sulfate.