Skip to main content
. 2017 Sep 12;8:1752. doi: 10.3389/fmicb.2017.01752

Table 3.

In silico prediction of protein function.

Protein BlastP (% identity; Eval) COGnitor InterProScan HHpred on PfamA-30 (amino-acid positions; Eval)
FI056_50102 A7M6Y2 O-antigen polymerase Wzy of Klebsiella pneumoniae (22%; 0.0000000006) COG3307 Lipid A core – O-antigen ligase and related enzymes PF13425 O-antigen ligase-like membrane protein PF13425 O-antigen ligase-like membrane protein (5 to 414; 8.7E-16)
DK002_320117 I6RSC6 Polysaccharide polymerase Wzy of Streptococcus pneumoniae (20%; 0.0000001) No hit No hit PF14296 O-antigen polysaccharide polymerase Wzy (4 to 417; 1.8E-14)
FPC840_340035 I6RSC6 Polysaccharide polymerase Wzy of Streptococcus pneumoniae (23.27%; 0.00002) No hit No hit PF01901 Putative O-antigen polymerase (24 to 415; 9.1E-14)