TABLE 1.
Summary of the sequencing results for spiked whey samples
| Sample IDa | Total no. of reads |
Avg read length |
% of reads mapped to reference genomes |
Avg coverage |
||||
|---|---|---|---|---|---|---|---|---|
| Before trimming | After trimming | Before trimming | After trimming | φ29 | T4 | φ29 | T4 | |
| D3 | 2,135,308 | 2,135,098 | 251.0 | 152.0 | 0.4 | 0.4 | 78.4 | 9.08 |
| D4 | 2,731,990 | 2,731,728 | 251.0 | 175.9 | 0.2 | 0.2 | 74.0 | 7.53 |
| D5 | 2,699,702 | 2,699,300 | 251.0 | 209.8 | 7.9 | 4.3 | 2,353.14 | 142.26 |
| G1 | 3,673,882 | 3,673,338 | 251.0 | 201.2 | 6.8 | 2.1 | 2,594.51 | 78.29 |
| I2 | 331,230 | 331,166 | 251.0 | 204.3 | 3.5 | 0.4 | 132.54 | 1.78 |
a
D, Denmark; G, Germany; I, Ireland.