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. 2017 Sep 15;7:11686. doi: 10.1038/s41598-017-12020-3

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Categories and differences of dominant alternative splicing (AS) events in the transcriptomes of the HuHan2B and HanFengB rice varieties. (a) The six splicing types are schematically illustrated, and the numbers of AS events in HuHan2B (red) and HanFengB (blue) are shown. Black indicates annotated exons, white boxes represent introns, and gray boxes denote novel transcript elements. (b) Comparison of the proportions of AS events in HuHan2B (left part of the subplot) and HanFengB (right part of the subplot), reflecting a high level of similarity between the AS events in these rice varieties. IR, intron retention; AA, alternate 3′ acceptor; AD, alternate 5′ donor; ES, exon skipping.