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. 2017 Sep 16;58:38. doi: 10.1186/s40529-017-0193-7

Table 1.

Summary of plastid RNA edits in Phalaenopsis orchid

Leaf Flower Commona Total Reportedb
Protein coding transcripts 67 69 57 79 43
 1st codon position 9 10 7 12 4
 2nd codon position 47 51 43 55 39
 3rd codon position 11 8 7 12 0
 Creation of start codon 2 2 1 3 1
 Creation of stop codon 4 5 3 6 0
 Nonsynonymous substitution 50 54 46 58 42
 Synonymous substitution 11 8 7 12 1
Non-protein coding transcripts 43 37 22 58 1
 tRNA 1 1 1 1 0
 rRNA 0 0 0 0 0
 Intron 4 6 2 8 0
 Intergenic spacer (IGS) 38 30 19 49 1
Total 110 106 79 137 44

aCommon RNA edits in both leaf and floral with editing status >5%

bPreviously reported in Zeng et al. (2007)