Table 2.
Percentage of in silico DNA-DNA hybridization (DDH)a and average nucleotide identities (ANI)b among the selected Elizabethkingia genomes
| E. meningoseptica EM3 |
E. anophelis
R26T [43] |
E. meningoseptica
ATCC 13253T [44] |
E. miricola
BM10T [45] |
E. endophytica
JM-87T [46] |
|
|---|---|---|---|---|---|
| E. meningoseptica EM3 |
31.90
80.15 |
91.10
98.52 |
31.20
80.44 |
32.70
80.25 |
|
| E. anophelis R26T |
31.90
80.15 |
33.60
80.26 |
68.80
91.52 |
78.60
97.49 |
|
| E. meningoseptica ATCC 13253T |
91.10
98.52 |
33.60
80.26 |
31.40
80.26 |
33.30
80.41 |
|
| E. miricola BM10T |
31.20
80.44 |
68.80
91.52 |
31.40
80.26 |
68.70
91.41 |
|
| E. endophytica JM-87T |
32.70
80.25 |
78.60
97.49 |
33.30
80.41 |
68.70
91.41 |
Nucleotide sequences were downloaded from GenBank. The accession numbers for E. anophelis R26T, E. meningoseptica ATCC 13253T, E. miricola BM10T and E. endophytica JM-87T are NZ_ANIW01000001.1, NZ_ASAN01000001.1, NZ_CP011059.1 and NZ_CP016372, respectively
aIn silico DNA-DNA hybridization was calculated by using Genome-to-Genome Distance Calculator (GGDC) [47]. The percentage of DDH was shown on the top and bolded
bANI values were computed for pairwise genome comparison with using the OrthoANIu algorithm [48]. The percentage of ANI was shown on the bottom