Table 3.

Summary of iTRAQ protein ratios from Table S4.

Protein functional classa	Sheetb	Total (%)c	Ave.d	Rangee	> 1.2 (%)f	≥ 2 (%)g
Energy metabolism	1	61 (7.5%)	1.24 (1.40)	0.35–2.65	35 (57%)	5 (8%)
Lipid metab.	2	39 (4.8%)	1.42 (1.38)	0.48–2.63	29 (74%)	4 (10%)
Carbohydrate metab.	3	25 (3.1%)	1.24 (1.33)	0.42–3.06	16 (64%)	2 (8%)
Amino acid metab.	4	26 (3.2%)	1.20 (1.25)	0.33–1.79	17 (65%)	0
Secondary metab.	5	25 (3.1%)	1.24 (1.24)	0.36–2.91	13 (52%)	4 (16%)
Nucleotide metab.	6	21 (2.6%)	1.22 (1.21)	0.46–2.07	13 (62%)	2 (10%)
Coenzyme metab.	7	14 (1.7%)	1.11 (1.13)	0.44–2.09	7 (50%)	1 (7%)
Motility/Trafficking/Secretion	8	59 (7.2%)	1.10 (1.13)	0.47–3.23	21 (36%)	6 (10%)
General function	9	45 (5.5%)	1.10 (1.12)	0.52–4.19	16 (36)	3 (7%)
Protein modifn/Chaperones	10	87 (10.7%)	1.06 (1.06)	0.27–1.85	38 (44%)	0
Transporters/Ions	11	34 (4.2%)	1.11 (1.03)	0.42–3.66	14 (41%)	1 (3%)
Signal transduction	12	39 (4.8%)	1.02 (0.99)	0.35–2.99	14 (36%)	2 (5%)
Cytoskeleton/Cell. membranes	13	51 (6.2%)	1.00 (0.99)	0.40–5.33	13 (25%)	2 (4%)
Cellular/Pathogen defense	14	22 (2.7%)	1.01 (0.94)	0.18–2.10	9 (41%)	1 (4%)
Function unknown	15	61 (7.5%)	0.88 (0.89)	0.29–5.01	12 (20%)	4 (7%)
Transcription/RNA modifn.	16	52 (6.4%)	0.73 (0.74)	0.49–1.79	1 (2%)	0
Ribosomes/Translation	17	110 (13.5%)	0.72 (0.71)	0.33–1.34	3 (3%)	0
DNA replication/Cell division	18	44 (5.4%)	0.69 (0.68)	0.45–1.18	0	0
Aggregate total		815 (100%)			271 (33%)	37 (4.5%)

^aProtein functional class from Table S4.

^bSheet numbers in Table S4.

^cTotal number of proteins, with percentages.

^dArithmetic average of protein ratios (C/wStr1 over C7–10) with equal weight given to each of 815 proteins. (see Table S4). Weighted averages based on 1307 observations (see Fig. 4) are given in parentheses.

^eRange of protein ratios.

^fNumber of proteins with ratios > 1.2, with percentages.

^gNumber of proteins with ratios > 2.0, with percentages.