. 2017 Sep 18;7:11750. doi: 10.1038/s41598-017-10507-7

Table 2.

Functional annotation of the risk SNPs associated with WM microstructural abnormalities in schizophrenia.

CHR	POS (hg19)	SNP	Chromatin states	Motifs changed	Genes	Positional	RegulomeDB
CHR	POS (hg19)	SNP	Chromatin states	Motifs changed	Genes	annotation	RegulomeDB
8	1304999	kgp5929161	Enhancer	DMRT2	20 kb 3′ of DLGAP2	NA	TF binding or DNase peak
8	1304999	(rs62487409)	(ESC, iPSC)	DMRT2	20 kb 3′ of DLGAP2	NA	TF binding or DNase peak
14	20871645	rs8009925	Enhancer	5 altered motifs	TEP1	intronic	TF binding or DNase peak
14	20871645	rs8009925	(iPSC)	5 altered motifs	TEP1	intronic	TF binding or DNase peak
20	50083574	rs193091397	Enhancer	AhR,CHOP::CEBPalpha	NFATC2	intronic	No Data
20	50083574	rs193091397	(Blood & T-cell)	NRSF	NFATC2	intronic	No Data
2	202531547	rs7559992	Enhancer	6 altered motifs	MPP4	intronic	Others
2	202531547	rs7559992	(NH-A Astrocytes Primary Cells)	6 altered motifs	MPP4	intronic	Others
10	109575094	rs10509852	Enhancer	RXR::LXR	400kb 5′ of SORCS1	NA	TF binding or DNase peak
10	109575094	rs10509852	(ES-deriv, HSC & B-cel)	RXR::LXR	400kb 5′ of SORCS1	NA	TF binding or DNase peak
2	237497237	rs11901793	Enhancer	5 altered motifs	6.2 kb 3′ of CXCR7	NA	TF binding or DNase peak
2	237497237	rs11901793	(ES-deriv, Neurosph)	5 altered motifs	6.2 kb 3′ of CXCR7	NA	TF binding or DNase peak