Table 5.
Total fungal species identified using ITS1 metagenomic workflow
Specimen type (number of specimens with identified species) | Fungal NGS Species |
---|---|
Throat Swab (1), Sputum (1), Seminal fluid (1), | Candida albicans a |
Sputum (1), Bronchial wash (1) | Candida tropicalis a |
Throat Swab (1) | Lomatium nevadense a |
Endotracheal secretion (1) | Saccharomyces cerevisiae a |
Pus Swab (1) | Uwebraunia a |
Pus Swab (1) | Candida orthopsilosis a |
a species of highest abundance