TABLE 2.
Top 30 DEGs common to all time pointsa
| DEG | Log2 fold change on day p.i.: |
|||
|---|---|---|---|---|
| 1 | 3 | 5 | 7 | |
| BPI-like | 4.63326 | 5.96431 | 6.62699 | 4.99055 |
| CCL5 | 4.19982 | 5.716 | 7.14783 | 4.57728 |
| IL-8L1 | 3.24065 | 5.66709 | 6.42486 | 4.57668 |
| DUOXA1 | 2.64219 | 5.5092 | 3.67084 | 3.25108 |
| OLFM4 | 5.36158 | 5.33946 | 3.3068 | 3.02132 |
| ENPP3 | 4.47861 | 5.31691 | 4.6874 | 4.15996 |
| NOX1 | 4.88366 | 5.30958 | 4.89579 | 4.21683 |
| RARRES1 | 3.83189 | 4.95679 | 3.30349 | 2.91255 |
| LYG2 | 3.0302 | 4.8369 | 4.90495 | 2.41283 |
| CCLI10 | 2.69156 | 4.83626 | 5.21577 | 4.89954 |
| TLR4 | 4.96328 | 4.70113 | 6.11835 | 3.53102 |
| TLR15 | 4.3237 | 4.67092 | 4.92173 | 4.93934 |
| SOCS3 | 4.3124 | 4.60883 | 4.19433 | 3.76184 |
| LOC428141 | 4.33948 | 4.45456 | 4.08157 | 4.11758 |
| IL4I1 | 3.48615 | 4.41317 | 4.88468 | 2.5721 |
| MMP9 | 3.91132 | 4.38006 | 6.95883 | 4.96884 |
| IL1R2 | 4.48184 | 4.34042 | 4.09522 | 4.27765 |
| IRG1 | 3.83225 | 4.33338 | 4.58645 | 3.81257 |
| ENSGALG00000019325 | 1.44738 | 4.27359 | 2.82898 | 2.63588 |
| CALCA | 5.0309 | 4.24828 | 4.16685 | 3.16541 |
| IL-1BETA | 3.37598 | 4.14312 | 5.21417 | 2.70404 |
| IL-8L2 | 3.26202 | 3.85625 | 4.62414 | 3.81967 |
| MLKL | 3.11988 | 3.7713 | 3.86533 | 2.17199 |
| DPYSL3 | 0.982301 | 3.66839 | 3.90804 | 3.09111 |
| SLC5A11 | 3.36215 | 3.61828 | 2.95951 | 2.1136 |
| ENSGALG00000002902 | 2.30604 | 3.53979 | 4.36105 | 2.19814 |
| LY96 | 2.82024 | 3.5325 | 4.28532 | 3.65581 |
| SPP1 | 3.36144 | 3.50817 | 4.26922 | 3.19621 |
| LGALS2 | 0.928863 | 3.30387 | 3.40564 | 3.20535 |
| BPI | 3.34441 | 3.20803 | 3.7472 | 2.7993 |
a
Sorted by day 3 postinfection log2 fold changes as indicated by Cuffdiff.