Table 2.
Summary statistics of Illumina sequencing for ‘Red Clapp’s Favorite’
| Samples | Clean reads | GC Content | % ≥ Q30 | Mapped reads ratio |
|---|---|---|---|---|
| T04 | 23,800,724 | 47.34% | 94.28% | 76.02% |
| T05 | 35,882,930 | 47.03% | 94.78% | 75.87% |
| T06 | 29,358,478 | 47.44% | 94.75% | 74.40% |
| T07 | 31,642,033 | 47.49% | 94.74% | 76.99% |
| T08 | 29,876,598 | 47.55% | 94.15% | 75.30% |
| T09 | 26,183,442 | 47.21% | 94.69% | 74.37% |
| T10 | 33,015,521 | 46.83% | 94.83% | 76.61% |
| T11 | 32,051,417 | 47.10% | 95.12% | 76.99% |
| T12 | 30,183,239 | 47.33% | 94.54% | 75.75% |
Clean reads represent total pair-end reads of clean data; Mapped reads ratio represents the percent of clean data mapped to the pear reference genome (http://www.rosaceae.org/species/pyrus/pyrus_communis/genome_v1.0)