Table 1. Primer sequences and PCR conditions used in this study.
DNA target | Primer set | Locus | Direction | Sequence | Annealing temperature | Reference |
---|---|---|---|---|---|---|
Vertebrate DNA | Kitano 12S* | 12S | F | 5′-CCC AAA CTG GGA TTA GAT ACC C-3′ | 57° | Alcaide et al. (2009) |
R | 5′-GTT TGC TGA AGA TGG CGG TA-3′ | Alcaide et al. (2009) | ||||
Melton 12S | 12S | F | 5′-ACT GGG ATT AGA TAC CCC ACT ATG-3′ | 53° | Hwang et al. (2010) | |
R | 5′-ATC GAT TAT AGA ACA GGC TCC TC-3′ | Hwang et al. (2010) | ||||
Vert COI | COI | M13BC-FW | 5′-TGT AAA ACG ACG GCC AGT HAA YCA YAA RGA YAT YGG NAC-3′ | 45° | Kitano et al. (2007) | |
BCV-RV1 | 5′-GCY CAN AYY ATN CYY RTR TA-3′ | Kitano et al. (2007) | ||||
DC-CytB | CytB | UP | 5-CRT GAG GMC AAA TAT CHT TYT-3 | 42.5° | Maslov et al. (1996) | |
DW | 5-ART ATC ATT CWG GTT TAA TRT-3 | Maslov et al. (1996) | ||||
Avian CytB | CytB | F | 5′-GAC TGT GAC AAA ATC CCN TTC CA-3′ | 55° | Melton & Holland (2007) | |
R | 5′-GGT CTT CAT CTY HGG YTT ACA AGA C-3′ | Melton & Holland (2007) | ||||
Mammalian CytB | CytB | F | 5′-CGA AGC TTG ATA TGA AAA ACC ATC GTT G-3′ | 55° | Melton & Holland (2007) | |
R | 5′-TGT AGT TRT CWG GGT CHC CTA-3′ | Melton & Holland (2007) | ||||
Vert CytB | CytB | CB1-L | 5′-CCC CTC AGA ATA TTT GTC CTC A-3′ | 57° | Mota et al. (2007) | |
CB2-H | 5′-CAT CCA ACA TCT CAG CAT GAT GAA A-3′ | Mota et al. (2007) | ||||
Trypanosome DNA | Tcz* | 18S | 18sf | 5′-TTA ACG GGA ATA TCC TCA GC-3′ | 50° | Ngo & Kramer (2003) |
S829r | 5′-GCA TCA CAG ACC TGC TGT TG-3′ | Palumbi et al. (1991) |