Table 3.

Gene Ontology analysis of down-regulated genes under Utx conditional knockout.

ID	Name	p-Value	FDR B&H	FDR B&Y	Bonferroni	Number of genes from input	Number of genes in annotation
GO:0007268	Synaptic transmission	1.14E−06	2.95E−04	2.61E−03	4.43E−03	21	680
GO:0043269	Regulation of ion transport	3.42E−06	5.16E−04	4.57E−03	1.33E−02	20	669
GO:0006811	Ion transport	4.10E−06	5.69E−04	5.03E−03	1.59E−02	34	1627
GO:0005509	Calcium ion binding	9.15E−05	2.67E−02	1.92E−01	6.76E−02	18	710
GO:0097458	Neuron part	1.93E−05	1.04E−03	6.80E−03	7.31E−03	31	1552
GO:0043005	Neuron projection	6.97E−05	1.65E−03	1.08E−02	2.64E−02	25	1199
GO:0044456	Synapse part	7.18E−04	1.01E−02	6.57E−02	2.72E−01	16	714
GO:0045202	Synapse	9.14E−04	1.16E−02	7.53E−02	3.47E−01	18	876
GO:0043025	Neuronal cell body	1.44E−03	1.65E−02	1.08E−01	5.45E−01	14	620
GO:0097060	Synaptic membrane	1.59E−03	1.72E−02	1.12E−01	6.01E−01	9	300
GO:0030425	Dendrite	2.70E−03	2.43E−02	1.59E−01	1.00E+00	13	592