Skip to main content
. 2017 Jun 29;8(38):63506–63517. doi: 10.18632/oncotarget.18843

Table 1. Table of patient cohorts analysed.

Tumour type Database name Data features and Source Pubmed reference
DIPG Glioma DIPG - Paugh - 37 - MAS5.0 - u133p2 n= 43 Affymetrix Human Genome U133 Plus 2.0 arrays. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3209696/ [8]
Glioma Glioma - French - 284 - MAS5.0 - u133p2 Glioma pediatric - Paugh - 53 - MAS5.0 - u133p2 n=28 Affymetrix https://www.ncbi.nlm.nih.gov/pubmed/19920198 [9] n=53 Affymetrix Human Genome U133 Plus 2.0 arrays https://www.ncbi.nlm.nih.gov/pubmed?term=20479398 [10]
ATRT ATRT - Kool - 49 - MAS5.0 - u133p2 ATRT - Birks - 18 - MAS5.0 - u133p2 n=49 Affymetrix GeneChip Human Genome U133. https://www.ncbi.nlm.nih.gov/pubmed/26923874 [11] n=18 Affymetrix HG-U133 Plus 2 GeneChip microarrays. https://www.ncbi.nlm.nih.gov/pubmed?term=21946044 [12]
Ependymoma Ependymoma - Donson - 19 - MAS5.0 - u133p2 Ependymoma - Gilbertson - 83 - MAS5.0 - u133p2 n=19 Affymetrix HG-U133 Plus 2 microarray chips https://www.ncbi.nlm.nih.gov/pubmed?term=19917695 [13] n=83 Affymetrix U133 Plusv2 and Agilent miRNA arrays https://www.ncbi.nlm.nih.gov/pubmed?term=20639864 [14]
PNET CNS-PNET - Kool - 182 - MAS5.0 - u133p2 CNS/PNET - Grundy - 24 - MAS5.0 - u133p2 n=182 Affymetrix GeneChip Human Genome U133 Plus 2.0 Array. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139621/ [15] n=24 Affymetrix U133 plus 2.0 arrays. https://www.ncbi.nlm.nih.gov/pubmed/21798848 [16]
Medulloblastoma Medulloblastoma - Thompson - 46 - MAS5.0 - u133a Medulloblastoma PLoS One - Kool - 62 - MAS5.0 - u133p2 n=46 U133av2 Affymetrix oligonucleotide array. https://www.ncbi.nlm.nih.gov/pubmed/16567768 [17] n=62 Affymetrix HG-U133 plus 2.0. https://www.ncbi.nlm.nih.gov/pubmed?term=18769486 [18]
Osteosarcoma Osteosarcoma - Kobayashi - 27 - MAS5.0 - u133p2 Osteosarcoma - Buddingh - 53 - vst - ilmnhwg6v2 Osteosarcoma - Kuijjer - 127 - vst - ilmnhwg6v2 n=27 Affymetrix Human Genome U133 Plus 2.0 array http://www.ncbi.nlm.nih.gov/pubmed?term=20159990 [19] n=53 Illumina Human-6 v2.0 Expression BeadChips http://www.ncbi.nlm.nih.gov/pubmed?term=21372215 [20] n=84 Illumina Human-6 v2.0 arrays/ http://www.ncbi.nlm.nih.gov/pubmed?term=22454324 [21]
Ewings sarcoma Ewing Sarcoma - Delattre - 117 - MAS5.0 - u133p2 Ewing Sarcoma - Francesconi - 37 - MAS5.0 - u133p2 n=117 Affymetrix hgu133Plus2 arrays. http://www.ncbi.nlm.nih.gov/pubmed?term=22327514 [22] n=37 Affymetrix https://www.ncbi.nlm.nih.gov/pubmed/19307502 [23]
Rhabdomyosarcoma Rhabdomyosarcoma - Davicioni - 147 - MAS5.0 - u133a n=147 Affymetrix GeneChip Human U133A http://www.ncbi.nlm.nih.gov/pubmed?term=16849537 [24]