Table 1.
PDB code | antigen | antibody | epitope | paratope | refs | |
---|---|---|---|---|---|---|
| ||||||
2IPU | Aβ(1–8)peptide DAEFRHDS | Fabs of PFA1 | DAEFRHDS | WWDDD | [38] | |
| ||||||
2R0W | Aβ(1–8)peptide DAEFRHDS | Fabs of PFA2 | DAEFRHDS | WWDDD | [38] | |
| ||||||
2R0Z | GRIP1 | Fabs of PFA1 | AKFRHD | WWDDD | [38] | |
| ||||||
2IPT | N/A | PFA1 Fab | N/A | N/A | [38] | |
| ||||||
2IQ9 | N/A | PFA2 FAB fragment, triclinic apo form | N/A | N/A | [38] | |
| ||||||
2IQA | N/A | PFA2 FAB fragment, monoclinic apo form | N/A | N/A | [38] | |
| ||||||
3BAE | Aβ(1–28) | WO2 | Aβ(2–8) | [39] | ||
| ||||||
3BKC | N/A | WO2 Fab (Form B) | N/A | N/A | [39] | |
| ||||||
3BKM | N/A | WO2 Fab (Form A) | N/A | N/A | [39] | |
| ||||||
3BKJ | Aβ (1–16) | WO2 Fab | Aβ(2–8) | [39] | ||
| ||||||
3EYS | pyro-Glu3-A pEFRHDS | PFA1 | [44] | |||
| ||||||
3EYS | Ror2 REEFRHEA | PFA1 | [44] | |||
| ||||||
3IFO | Aβ 1–7 | 10D5 Fabs | 3EFRHD7 | [40] | ||
| ||||||
3IFL | Aβ 1–7 | 12A11 Fabs | 3EFRHD7 | [40] | ||
| ||||||
3IFN | Aβ 1–40 | 12A11 Fabs | 3EFRHD7 | [40] | ||
| ||||||
3IFP | Aβ 1–7 | 12B4 Fabs | 3EFRHD7 | [40] | ||
| ||||||
3LN9 | Amyloid Fibril | B10 | ? | positively charged residues of CDRs1–3 | [47] | |
| ||||||
4OJF | Aβ 1–8 | 3D6 (Bapineuzumab) | 1DAEFR5 | L1 24KSSQSLLDSDGKTYLN34 | [48] | |
L2 50LVSKLDS56 | ||||||
L3 89WQGTHFPRT97 | ||||||
H1 26GFTFSNYGMS35 | ||||||
H2 50SIRSGGGRTYYSDNVKG65 | ||||||
H3 95YDHYSGSSDY102 | ||||||
| ||||||
4HIX | Aβ 1–40 | Bapineuzumab | 1DAEFRH6 | [48] | ||
| ||||||
4IFO | IDE | Fab(IDE) | K324/Y325/402/459/R 460/D462/E465/ | Y54/Y55/102/Y114/S108/109/Y1 12/Y110 | [79] | |
| ||||||
3MCL | N/A | C706 Fab | N/A | N/A | [80] | |
| ||||||
3O11 | N/A | C706 Fab | N/A | N/A | [80] | |
| ||||||
3TPK | N/A | KW1 | [46] | |||
| ||||||
3U0T | Aβ 40 | Ponezumab | Aβ30–40 | [53] | ||
| ||||||
4M1C | IDE/ Aβ16–20 complex | Fab | ||||
| ||||||
4ONF | Aβ 1–7 | 3D6 | 1DAEFRHD7 | [49] | ||
| ||||||
4ONG | Aβ 1–40 | 3D6 | 1DAEFRHD7 | [49] | ||
| ||||||
5CSZ | Aβ 1–11 | Gantenerumab | [45] | |||
| ||||||
4XXD | Aβ 12–28 | solanezumab Fab | Aβ 16–26 | [51] |