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. Author manuscript; available in PMC: 2017 Nov 1.
Published in final edited form as: Biochim Biophys Acta. 2016 Jun 3;1860(11 Pt B):2672–2681. doi: 10.1016/j.bbagen.2016.05.040

Table 1.

Summary of the complex structure of Aβ-antibodies

PDB code antigen antibody epitope paratope refs

2IPU Aβ(1–8)peptide DAEFRHDS Fabs of PFA1 DAEFRHDS WWDDD [38]

2R0W Aβ(1–8)peptide DAEFRHDS Fabs of PFA2 DAEFRHDS WWDDD [38]

2R0Z GRIP1 Fabs of PFA1 AKFRHD WWDDD [38]

2IPT N/A PFA1 Fab N/A N/A [38]

2IQ9 N/A PFA2 FAB fragment, triclinic apo form N/A N/A [38]

2IQA N/A PFA2 FAB fragment, monoclinic apo form N/A N/A [38]

3BAE Aβ(1–28) WO2 Aβ(2–8) [39]

3BKC N/A WO2 Fab (Form B) N/A N/A [39]

3BKM N/A WO2 Fab (Form A) N/A N/A [39]

3BKJ Aβ (1–16) WO2 Fab Aβ(2–8) [39]

3EYS pyro-Glu3-A pEFRHDS PFA1 [44]

3EYS Ror2 REEFRHEA PFA1 [44]

3IFO Aβ 1–7 10D5 Fabs 3EFRHD7 [40]

3IFL Aβ 1–7 12A11 Fabs 3EFRHD7 [40]

3IFN Aβ 1–40 12A11 Fabs 3EFRHD7 [40]

3IFP Aβ 1–7 12B4 Fabs 3EFRHD7 [40]

3LN9 Amyloid Fibril B10 ? positively charged residues of CDRs1–3 [47]

4OJF Aβ 1–8 3D6 (Bapineuzumab) 1DAEFR5 L1 24KSSQSLLDSDGKTYLN34 [48]
L2 50LVSKLDS56
L3 89WQGTHFPRT97
H1 26GFTFSNYGMS35
H2 50SIRSGGGRTYYSDNVKG65
H3 95YDHYSGSSDY102

4HIX Aβ 1–40 Bapineuzumab 1DAEFRH6 [48]

4IFO IDE Fab(IDE) K324/Y325/402/459/R 460/D462/E465/ Y54/Y55/102/Y114/S108/109/Y1 12/Y110 [79]

3MCL N/A C706 Fab N/A N/A [80]

3O11 N/A C706 Fab N/A N/A [80]

3TPK N/A KW1 [46]

3U0T Aβ 40 Ponezumab Aβ30–40 [53]

4M1C IDE/ Aβ16–20 complex Fab

4ONF Aβ 1–7 3D6 1DAEFRHD7 [49]

4ONG Aβ 1–40 3D6 1DAEFRHD7 [49]

5CSZ Aβ 1–11 Gantenerumab [45]

4XXD Aβ 12–28 solanezumab Fab Aβ 16–26 [51]