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. Author manuscript; available in PMC: 2018 Oct 15.
Published in final edited form as: Biol Psychiatry. 2017 Apr 4;82(8):594–600. doi: 10.1016/j.biopsych.2017.03.018

Table 2.

Numbers of DEPs identified using paired or unpaired analysis at different FDR.

Diagnostic Paired analysis Unpaired analysis

FDR

0.05 0.1 0.2 0.3 0.5 0.05 0.1 0.2 0.3 0.5
BP-L3 0 0 2 2 2 0 0 0 0 0
BP-L5 0 0 0 4 5 0 0 3 3 33
MDD-L3 0 0 0 0 17 0 0 0 4 4
MDD-L5 0 0 0 0 4 0 0 0 0 4
SZ-L3 77 331 1337 3123 8358 70 326 1268 2850 7532
SZ-L5 23 302 1309 3205 8614 61 288 1441 2997 8510