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. 2017 Sep 20;8:1773. doi: 10.3389/fmicb.2017.01773

Table 3.

Collection of C-terminal protein fusions for marker-less integration.

Plasmid (pGF) Marker(s) Description Size (amino acids) References
1204 1xFLAG-Linker (25)-GFP(β11) Biochemical Tag + Split GFP Taga 54 Hopp et al., 1988; Cabantous et al., 2013
1205 1xFLAG-Linker (25)-SpeI-6xHIS Biochemical Tagsb 41 Hochuli et al., 1988
1206 mCherry(opt) Yeast Codon Optimized Fluorescent Proteinc 235 Shaner et al., 2004
1207C anti-GFP Nanobody Anti-GFP Protein Tetherd 117 Rothbauer et al., 2006; Kubala et al., 2010
1208 GST Biochemical Tage 225 Benard and Bokoch, 2002
1209 1xFLAG-Linker(25)-3xHA Biochemical Tagf 65 Wilson et al., 1984; Field et al., 1988
1302 NLS Cellular Localizationg 11 Kalderon et al., 1984
1303 NES Cellular Localizationh 11 Xu et al., 2012
1304 1xMYC Biochemical Tagi 10 Hilpert et al., 2001; Krauss et al., 2008
1305 MBP Biochemical Tagj 375 Duplay et al., 1984
1306 BirA(R118G) Proximity-Dependent Protein Biotinylationk 321 Choi-Rhee et al., 2004; Cronan, 2005
1307 CAAX Box Motif Cellular Localizationl 9 Mitchell et al., 1994
1309 SNAP tag Fluorescent Proteinm 182 Juillerat et al., 2003
1310 S. pombe His5 Cellular Growth Screeningn 216 Longtine et al., 1998
1311 mScarlet(opt) WT Yeast Codon Optimized Fluorescent Proteino 231 Bindels et al., 2017
1379 eGFP(opt) Yeast Codon Optimized Fluorescent Proteinp 237 Cinelli et al., 2000
1380 ymUkG1(opt) Yeast Codon Optimized Fluorescent Proteinq 227 Kaishima et al., 2016
1381 eGFP(opt)-LactC2 Yeast Codon Optimized Fluorescent Protein + Membrane tetheringr 395 Andersen et al., 2000; Shao et al., 2008
a

FLAG Epitope, Flexible linker (GSGAGGSPGGGSGGSGSSASGGSTS), GFP(β-11) strand (EKRDHMVLLEYVTAAGITDAS).

b

FLAG Epitope, Flexible linker (GSGAGGSPGGGSGGSGSSASGGSTS), SpeI restriction site (residues TS), and 6x Histidine tag.

c

mCherry(opt); yeast optimization begins at residue 21; CAI (codon adaptation index) value = 0.92.

d

Anti-GFP Nanobody; yeast optimized (CAI value = 0.84)

e

Glutathione S-transferase (GST); sequence begins with “SPILGYW…” and ends with “…DLVPRGS.”

f

FLAG Epitope, Flexible linker (GSGAGGSPGGGSGGSGSSASGGSTS), and 3xHA (Human influenza hemagglutinin) tag (YPYDVPDYAGYPYDVPDYAGSYPYDVPDYACG).

g

Nuclear Localization Signal (SRADPKKKRKV) SV40 Large T-antigen.

h

Nuclear Export Signal (LAKILGALDIN).

i

MYC Epitope (EQKLISEEDL).

j

Maltose Binding Protein (MBP); sequence begins with “KIEEGKL…” and ends with “…NSSSARL”. There is a XhoI (residues LE) restriction site preceding the stop codon.

k

BirA(R118G); 35 kD DNA-binding biotin protein ligase in Escherichia coli.

l

CAAX Box Motif (GSGGCCIIS) from yeast Ras2.

m

SNAP Tag; 20 kDa mutant of the DNA repair protein O6-alkylguanine-DNA alkyltransferase.

n

S. pombe HIS5 gene product; Imidazoleglycerol phosphate dehydratase HisB.

o

mScarlet-WT(opt) (CAI value = 0.93).

p

eGFP(opt); yeast codon optimization begins after residue 9 (CAI = 0.92). Contains S65T, F64L, R88Q, and H239L.

q

ymUkG1(opt) yeast codon bias (CAI = 0.92).

r

eGFP(opt)-Lact-C2; Bovine Lactadherin C2 Domain (158 residues) binds phosphatidylserine on the inner leaflet of the plasma membrane.