Table 2. Detailed information of duplicated MtGRAS genes.
Groups | Gene symbol | Homolog | Protein identity | Types of duplication | Kac | Ksd | Ka/Ks |
---|---|---|---|---|---|---|---|
PAT1 | MtGRAS2 | MtGRAS30 | 76.21% | SDa | 0.149 | 0.819 | 0.181 |
LISCL | MtGRAS14 | MtGRAS16 | 84.12% | TDb | 0.081 | 0.092 | 0.882 |
LISCL | MtGRAS15 | MtGRAS16 | 76.21% | TD | 0.177 | 0.292 | 0.607 |
LISCL | MtGRAS13 | MtGRAS16 | 85.85% | TD | 0.070 | 0.099 | 0.708 |
LISCL | MtGRAS19 | MtGRAS18 | 71.40% | TD | 0.106 | 0.261 | 0.406 |
LISCL | MtGRAS19 | MtGRAS20 | 91.62% | TD | 0.040 | 0.085 | 0.467 |
LISCL | MtGRAS32 | MtGRAS35 | 97.77% | TD | 0.010 | 0.047 | 0.218 |
LISCL | MtGRAS32 | MtGRAS33 | 78.15% | TD | 0.121 | 0.404 | 0.300 |
SHR | MtGRAS27 | MtGRAS40 | 69.18% | SD | 0.206 | 1.115 | 0.185 |
SHR | MtGRAS41 | MtGRAS47 | 74.01% | SD | 0.169 | 1.048 | 0.161 |
HAM | MtGRAS49 | MtGRAS61 | 60.54% | SD | 0.315 | 1.407 | 0.224 |
HAM | MtGRAS29 | MtGRAS50 | 66.67% | SD | 0.248 | 1.543 | 0.161 |
SCL3 | MtGRAS24 | MtGRAS23 | 78.38% | TD | 0.122 | 0.333 | 0.367 |
SCL3 | MtGRAS24 | MtGRAS25 | 68.12% | TD | 0.221 | 0.364 | 0.607 |
SCL3 | MtGRAS38 | MtGRAS46 | 77.66% | SD | 0.134 | 0.968 | 0.139 |
SCR | MtGRAS9 | MtGRAS8 | 83.89% | TD | 0.082 | 0.267 | 0.307 |
SCR | MtGRAS9 | MtGRAS10 | 82.24% | TD | 0.093 | 0.284 | 0.326 |
a Segmental duplication.
b tandem duplication.
cNon-synonymous substitution rate.
dSynonymous substitution rate.