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. 2017 Sep 9;7(9):115. doi: 10.3390/brainsci7090115

Table 1.

Primers for VDR SNPs and PCR-RFLP conditions.

SNP Primer Sequence Restriction Enzyme PCR/RFLP Products (bp)
Fok-I Fok1R: 5-ATGGAAACACCTTGCTTCTTCTCCCTC-3
Fok11F: 5-AGCTGGCCCTGGCACTGACTCtGGCTCT-3
FastDigest Fok-I ff: 198, 69
FF: 267
Ff: 267, 198, 69
PCR product: 267
Bsm-I ABsm1F: 5-CGGGGAGTATGAAGGACAAA-3
ABsm1R: 5-CCATCTCTCAGGCTCCAAAG-3
FastDigest Bsm-I bb: 243, 105
BB: 348
Bb: 348, 243, 105
PCR product: 348
Taq-I ATaq1F: 5-GGATCCTAAATGCACGGAGA-3
ATaq1R: 5-AGGAAAGGGGTTAGGTTGGA-3
FastDigest Taq-I tt: 225, 200, 205
TT: 425, 205
Tt: 425, 225, 200, 205
PCR product: 630
Apa-I ATaq1F: 5-GGATCCTAAATGCACGGAGA-3
ATaq1R: 5-AGGAAAGGGGTTAGGTTGGA-3
FastDigest Apa-I aa: 484, 146
AA: 630
Aa: 630, 484, 146
PCR product: 630