. 2017 Sep 19;6(9):86. doi: 10.3390/jcm6090086

Table 3.

The abundance of the gut microbiota associated with Trimethylamine (TMA) production from choline * and/or carnitine ^† identified in T2DM-CKD and healthy subjects (HS). Mann–Whitney U test showed significant difference of increased (ꜛ) abundance of OTUs in the two groups, p < 0.05.

Phylum (Out of 20 Total)	Family (Out of 158 total)	Genus (Out of 357 Total)	T2DM-CKD (%)	HS (%)
Firmicutes	Tissierellaceae	Anaerococcus *^,ꜛ	0.001	0.00003
	Clostridiaceae	Clostridium *^,ꜛ	0.114	0.102
	Peptococcaceae	Desulfitobacter *^,ꜛ	0.00023	<10⁻⁵
	Enterococcaceae	Enterococcus *^,ꜛ	0.052	0.00025
	Streptococcaceae	Streptococcus *^,ꜛ	0.368	0.0013
Proteobacteria	Desulfovibrionaceae	Desulfovibrio *^,ꜛ	0.186	0.111
	Enterobacteriaceae	Enterobacter *^,ꜛ	0.0004	<10⁻⁵
	Enterobacteriaceae	Escherichia *^,^†^,ꜛ	0.0007	0.0001
	Enterobacteriaceae	Klebsiella *^,^†^,ꜛ	0.433	0.0086
	Enterobacteriaceae	Proteus *^,^†^,ꜛ	0.0142	<10⁻⁵
	Pseudomonadaceae	Pseudomonas *^,^†^,ꜛ	0.021	0.0012
	Moraxellaceae	Acinetobacter ^†^,ꜛ	0.0105	<10⁻⁵
	Enterobacteriaceae	Citrobacter ^†^,ꜛ	0.00088	0.00007