Table 2.
DETs annotated in 4 pathways.
| Pathway | Gene ID | Arabidopsis Homologues | CK (TPM) | Stage I (TPM) | Stage II (TPM) | Stage III (TPM) |
|---|---|---|---|---|---|---|
| DETs annotated in plant basal transcription factors | GRMZM2G017831 | AT4G36650 | 9.52 | 1.86 | 11.2 | 12.22 |
| GRMZM2G091586 | AT2G41630, AT3G10330 | 18.03 | 42.84 | 25.59 | 31.72 | |
| GRMZM2G045668 | AT1G03280, AT4G20340, AT4G20810 | 2.23 | 0.41 | 1.2 | 1.29 | |
| GRMZM2G064390 | AT1G03280, AT4G20340, AT4G20810 | 36.06 | 72.43 | 69.78 | 82.73 | |
| GRMZM2G114584 | AT1G17070, AT2G42330 | 2.84 | 11.38 | 8.2 | 4.07 | |
| GRMZM2G060284 | AT1G75510, AT3G52270 | 0 | 6.62 | 2.2 | 4.07 | |
| GRMZM2G049091 | AT1G75510, AT3G52270 | 32.62 | 75.33 | 33.99 | 42.44 | |
| GRMZM2G125259 | AT1G312240 | 7.7 | 2.07 | 2.4 | 0.43 | |
| GRMZM2G151717 | AT3G02160, AT4G34340, AT5G15570 | 1.82 | 1.86 | 0 | 0.64 | |
| GRMZM2G173309 | AT1G05055 | 1.01 | 7.45 | 6.2 | 4.93 | |
| GRMZM2G161418 | NA | 1.01 | 0 | 1.8 | 1.29 | |
| GRMZM2G110076 | AT1G54140 | 3.04 | 3.31 | 7.8 | 4.07 | |
| DETs annotated in plant hormone signal transduction | GRMZM2G133331 | AT1G68640 | 3.04 | 0 | 1.6 | 0 |
| GRMZM2G381991 | NA | 0 | 0.83 | 0 | 3.22 | |
| GRMZM2G030877 | AT1G08320 | 3.65 | 8.28 | 5 | 3.22 | |
| GRMZM2G132868 | NA | 4.05 | 13.24 | 2.8 | 3.86 | |
| GRMZM2G125243 | AT3G12250, AT5G06950, AT5G06960 | 0 | 7.86 | 5.6 | 4.5 | |
| GRMZM2G002075 | AT1G45249, AT1G49720, AT3G19290, AT4G34000, AT5G42910 | 5.06 | 6 | 11.4 | 7.72 | |
| GRMZM2G159134 | AT2G41070, AT3G56850 | 2.84 | 2.07 | 5.2 | 10.29 | |
| GRMZM2G161009 | AT2G41070, AT3G56850 | 5.67 | 16.97 | 12.4 | 12 | |
| GRMZM2G060290 | AT5G06839 | 3.85 | 36.63 | 8.8 | 21.01 | |
| GRMZM2G361847 | AT3G12250, AT5G06950, AT5G06960 | 61.59 | 81.75 | 117.76 | 147.25 | |
| GRMZM2G094352 | AT1G22070, AT1G77920, AT5G10030, AT5G65210 | 98.05 | 168.04 | 115.16 | 215.19 | |
| GRMZM2G131961 | AT1G22070, AT1G77920, AT5G10030, AT5G65210 | 113.05 | 95.4 | 77.37 | 237.7 | |
| GRMZM2G024973 | AT1G14920, AT1G66350, AT2G01570, AT3G03450, AT5G17490 | 160.05 | 63.74 | 42.79 | 55.08 | |
| GRMZM2G330012 | AT3G20220 | 1.82 | 1.03 | 4 | 2.79 | |
| GRMZM2G049229 | AT1G32640, AT4G17880, AT5G46760, AT5G46830 | 134.52 | 125.2 | 56.38 | 117.67 | |
| GRMZM2G001930 | AT1G32640, AT4G17880, AT5G46760, AT5G46830 | 528.97 | 287.87 | 149.55 | 230.84 | |
| GRMZM2G030280 | AT3G12250, AT5G06950, AT5G06960 | 13.98 | 31.46 | 11.4 | 23.15 | |
| DETs annotated in plant base excision repair | GRMZM2G012654 | AT2G27470 | 7.09 | 14.49 | 12.4 | 10.72 |
| GRMZM2G139031 | AT1G21710 | 2.03 | 1.24 | 5.8 | 2.36 |