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. 2017 May 22;8(37):61305–61317. doi: 10.18632/oncotarget.18064

Table 6. False-positive report probability values for associations between the PCa risk and the frequency of Genotypes of PI3K/AKT/mTOR variants.

Genotype Crude OR (95%CI) Pa Statistical powerb Prior probability
0.25 0.1 0.01 0.001 0.0001
All patients
mTOR rs17036508 CC vs TT 3.71(1.76-7.84) 0.0006 0.008 0.18 0.397 0.879 0.986 0.999
mTOR rs17036508 CC vs CT/TT 3.68(1.74-7.76) 0.0003 0.005 0.15 0.345 0.853 0.983 0.998
mTOR rs2295080 GT vs TT 0.53(0.32-0.89) 0.0484 0.862 0.144 0.336 0.848 0.982 0.998
mTOR rs2295080 GG/GT vs TT 0.57(0.35-0.93) 0.0236 0.829 0.079 0.204 0.738 0.966 0.997
raptor rs1468033 AG vs GG 1.62(1.27-2.08) 0.0006 0.415 0.004 0.013 0.125 0.591 0.935
raptor rs1468033 AA/AG vs GG 1.59(1.25-2.02) 0.0001 0.284 0.001 0.003 0.034 0.26 0.779
mTOR rs17036508
 Age≤71 yrs, CT/CC vs TT 1.69(1.11-2.57) 0.0143 0.363 0.106 0.262 0.796 0.975 0.997
 Age≤71 yrs, CC vs CT/CC 4.24(1.56-11.50) 0.0022 0.61 0.011 0.031 0.263 0.783 0.973
 Age>71 yrs,CC vs CT/CC 3.14(1.02-9.69) 0.0366 0.876 0.111 0.273 0.805 0.977 0.998
 BMI<=24,CC vs CT/CC 2.72(1.02-7.24) 0.0378 0.896 0.112 0.275 0.807 0.977 0.998
 BMI>24,CC vs CT/CC 5.40(1.67-17.45) 0.0017 0.571 0.009 0.026 0.228 0.748 0.968
 Ever smoking, CC vs CT/TT 4.62(1.73-12.33) 0.0008 0.457 0.005 0.016 0.148 0.636 0.946
 uygur, CC vs CT/TT 4.39(1.89-10.21) 0.0002 0.160 0.004 0.011 0.110 0.555 0.926
mTOR rs2295080
 BMI>24, GG/GT vs TT 0.46(0.23-0.90) 0.0213 0.833 0.071 0.187 0.717 0.962 0.996
 Ever smoking, GG/GT vs TT 0.42(0.22-0.80) 0.0067 0.722 0.027 0.077 0.479 0.903 0.989
 Age≤71 yrs, GG vs GT/TT 0.66(0.46-0.96) 0.0288 0.504 0.146 0.34 0.85 0.983 0.998
 Age>71 yrs, GG vs GT/TT 1.43(1.04-1.96) 0.0255 0.817 0.086 0.219 0.755 0.969 0.997
Raptor rs1468033
 Age>71 yrs, AA/AG vs GG 1.81(1.32-2.48) 0.0002 0.276 0.002 0.006 0.067 0.42 0.879
 BMI>24, AA/AG vs GG 2.02(1.42-2.87) <0.0001 0.198 0.002 0.005 0.048 0.335 0.835
 Ever smoking, AA/AG vs GG 1.59(1.15-2.20) 0.0051 0.547 0.027 0.077 0.48 0.903 0.989
 Never smoking, AA/AG vs GG 1.60(1.12-2.28) 0.0099 0.712 0.040 0.111 0.579 0.933 0.993
 Uygur group, AA/AG vs GG 1.63(1.23-2.14) 0.0005 0.433 0.003 0.010 0.103 0.536 0.920
 BMI>24, AA vs AG/GG 5.13(1.94-13.56) 0.0003 0.382 0.002 0.007 0.072 0.440 0.887
AKT2 rs7250897
 Age>71 yrs, CT/CC vs TT 1.82(1.33-2.51) 0.0002 0.284 0.002 0.006 0.065 0.413 0.876
 BMI>24, CT/CC vs TT 1.60(1.12-2.25) 0.0085 0.662 0.037 0.104 0.56 0.928 0.992
Combined effect (risk genotype)
0 vs >=1 2.46(1.65-3.67) <0.0001 0.050 0.006 0.018 0.165 0.666 0.952

OR: odds ratio; CI: confidence interval; BMI: body mass index.

aChi-square test was used to calculate the genotype frequency distributions.

bStatistical power was calculated using the number of observations in the subgroup and the OR and P values in this table.

The results in false-positive report probability analysis were in bold, if the prior probability < 0.2.