Table 6. False-positive report probability values for associations between the PCa risk and the frequency of Genotypes of PI3K/AKT/mTOR variants.
Genotype | Crude OR (95%CI) | Pa | Statistical powerb | Prior probability | ||||
---|---|---|---|---|---|---|---|---|
0.25 | 0.1 | 0.01 | 0.001 | 0.0001 | ||||
All patients | ||||||||
mTOR rs17036508 CC vs TT | 3.71(1.76-7.84) | 0.0006 | 0.008 | 0.18 | 0.397 | 0.879 | 0.986 | 0.999 |
mTOR rs17036508 CC vs CT/TT | 3.68(1.74-7.76) | 0.0003 | 0.005 | 0.15 | 0.345 | 0.853 | 0.983 | 0.998 |
mTOR rs2295080 GT vs TT | 0.53(0.32-0.89) | 0.0484 | 0.862 | 0.144 | 0.336 | 0.848 | 0.982 | 0.998 |
mTOR rs2295080 GG/GT vs TT | 0.57(0.35-0.93) | 0.0236 | 0.829 | 0.079 | 0.204 | 0.738 | 0.966 | 0.997 |
raptor rs1468033 AG vs GG | 1.62(1.27-2.08) | 0.0006 | 0.415 | 0.004 | 0.013 | 0.125 | 0.591 | 0.935 |
raptor rs1468033 AA/AG vs GG | 1.59(1.25-2.02) | 0.0001 | 0.284 | 0.001 | 0.003 | 0.034 | 0.26 | 0.779 |
mTOR rs17036508 | ||||||||
Age≤71 yrs, CT/CC vs TT | 1.69(1.11-2.57) | 0.0143 | 0.363 | 0.106 | 0.262 | 0.796 | 0.975 | 0.997 |
Age≤71 yrs, CC vs CT/CC | 4.24(1.56-11.50) | 0.0022 | 0.61 | 0.011 | 0.031 | 0.263 | 0.783 | 0.973 |
Age>71 yrs,CC vs CT/CC | 3.14(1.02-9.69) | 0.0366 | 0.876 | 0.111 | 0.273 | 0.805 | 0.977 | 0.998 |
BMI<=24,CC vs CT/CC | 2.72(1.02-7.24) | 0.0378 | 0.896 | 0.112 | 0.275 | 0.807 | 0.977 | 0.998 |
BMI>24,CC vs CT/CC | 5.40(1.67-17.45) | 0.0017 | 0.571 | 0.009 | 0.026 | 0.228 | 0.748 | 0.968 |
Ever smoking, CC vs CT/TT | 4.62(1.73-12.33) | 0.0008 | 0.457 | 0.005 | 0.016 | 0.148 | 0.636 | 0.946 |
uygur, CC vs CT/TT | 4.39(1.89-10.21) | 0.0002 | 0.160 | 0.004 | 0.011 | 0.110 | 0.555 | 0.926 |
mTOR rs2295080 | ||||||||
BMI>24, GG/GT vs TT | 0.46(0.23-0.90) | 0.0213 | 0.833 | 0.071 | 0.187 | 0.717 | 0.962 | 0.996 |
Ever smoking, GG/GT vs TT | 0.42(0.22-0.80) | 0.0067 | 0.722 | 0.027 | 0.077 | 0.479 | 0.903 | 0.989 |
Age≤71 yrs, GG vs GT/TT | 0.66(0.46-0.96) | 0.0288 | 0.504 | 0.146 | 0.34 | 0.85 | 0.983 | 0.998 |
Age>71 yrs, GG vs GT/TT | 1.43(1.04-1.96) | 0.0255 | 0.817 | 0.086 | 0.219 | 0.755 | 0.969 | 0.997 |
Raptor rs1468033 | ||||||||
Age>71 yrs, AA/AG vs GG | 1.81(1.32-2.48) | 0.0002 | 0.276 | 0.002 | 0.006 | 0.067 | 0.42 | 0.879 |
BMI>24, AA/AG vs GG | 2.02(1.42-2.87) | <0.0001 | 0.198 | 0.002 | 0.005 | 0.048 | 0.335 | 0.835 |
Ever smoking, AA/AG vs GG | 1.59(1.15-2.20) | 0.0051 | 0.547 | 0.027 | 0.077 | 0.48 | 0.903 | 0.989 |
Never smoking, AA/AG vs GG | 1.60(1.12-2.28) | 0.0099 | 0.712 | 0.040 | 0.111 | 0.579 | 0.933 | 0.993 |
Uygur group, AA/AG vs GG | 1.63(1.23-2.14) | 0.0005 | 0.433 | 0.003 | 0.010 | 0.103 | 0.536 | 0.920 |
BMI>24, AA vs AG/GG | 5.13(1.94-13.56) | 0.0003 | 0.382 | 0.002 | 0.007 | 0.072 | 0.440 | 0.887 |
AKT2 rs7250897 | ||||||||
Age>71 yrs, CT/CC vs TT | 1.82(1.33-2.51) | 0.0002 | 0.284 | 0.002 | 0.006 | 0.065 | 0.413 | 0.876 |
BMI>24, CT/CC vs TT | 1.60(1.12-2.25) | 0.0085 | 0.662 | 0.037 | 0.104 | 0.56 | 0.928 | 0.992 |
Combined effect (risk genotype) | ||||||||
0 vs >=1 | 2.46(1.65-3.67) | <0.0001 | 0.050 | 0.006 | 0.018 | 0.165 | 0.666 | 0.952 |
OR: odds ratio; CI: confidence interval; BMI: body mass index.
aChi-square test was used to calculate the genotype frequency distributions.
bStatistical power was calculated using the number of observations in the subgroup and the OR and P values in this table.
The results in false-positive report probability analysis were in bold, if the prior probability < 0.2.