Table 1.
Soybean SnRK2 gene family.
| Gene Name | Locus Name | Gene Location 1 | Transcript Length (bp) | Protein Length (aa) | Molecular Weight (kDa) | Isoelectric Point (pI) | Grand Average of Hydropathy (GRAVY) | Best Hits of Arabidopsis and Rice | Domain (Start–End aa) 2 |
|---|---|---|---|---|---|---|---|---|---|
| GmSnRK2.1 | Glyma01g39020 | Chr01:50978690–50990291: − | 2056 | 359 | 40.83 | 4.69 | −0.245 | AtSRK2I; OsSAPK10 | IPR017441 (27–50); IPR008271 (136–148) |
| GmSnRK2.2 | Glyma01g41260 (SPK1) | Chr01:52822191–52826139: + | 1432 | 339 | 38.56 | 6.44 | −0.432 | AtSRK2E; OsSAPK3 | IPR017441 (11–34); IPR008271 (120–132) |
| GmSnRK2.3 | Glyma02g15330 | Chr02:13828174–13832341: + | 1813 | 354 | 40.21 | 5.04 | −0.359 | AtSRK2E; OsSAPK10 | IPR017441 (24–47); IPR008271 (133–145) |
| GmSnRK2.4 | Glyma02g37090 | Chr02:42422548–42426147: − | 1577 | 338 | 38.3 | 5.38 | −0.267 | AtSRK2C; OsSAPK2 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.5 | Glyma04g38270 (SPK4) | Chr04:44680353–44684054: + | 1763 | 349 | 40.35 | 6.1 | −0.497 | AtSRK2A; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.6 | Glyma05g31000 | Chr05:36237913–36240990: + | 1376 | 309 | 35.37 | 5.17 | −0.366 | AtSRK2C; OsSAPK2 | IPR017441 (10–33); IPR008271 (85–97) |
| GmSnRK2.7 | Glyma05g33170 | Chr05:37897658–37901759: − | 2020 | 351 | 40.43 | 5.95 | −0.523 | AtSRK2A; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.8 | Glyma05g05540 | Chr05:4967484–4972474: − | 1532 | 336 | 38.12 | 5.6 | −0.447 | AtSRK2E; OsSAPK3 | IPR017441 (11–34); IPR008271 (120–132) |
| GmSnRK2.9 | Glyma05g09460 | Chr05:9361881–9367360: − | 1922 | 360 | 40.8 | 4.75 | −0.268 | AtSRK2I; OsSAPK10 | IPR017441 (29–52); IPR008271 (138–150) |
| GmSnRK2.10 | Glyma06g16780 | Chr06:13183468–13187110: − | 1648 | 346 | 39.98 | 6.48 | −0.468 | AtSRK2A; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.11 | Glyma07g29500 | Chr07:34352503–34356772: − | 2034 | 364 | 41.46 | 4.93 | −0.334 | AtSRK2E; OsSAPK10 | IPR017441 (29–52); IPR008271 (138–150) |
| GmSnRK2.12 | Glyma07g33120 | Chr07:38032643–38037084: − | 1769 | 353 | 40.07 | 5.04 | −0.344 | AtSRK2E; OsSAPK10 | IPR017441 (24–47); IPR008271 (133–145) |
| GmSnRK2.13 | Glyma08g14210 | Chr08:10340382–10343745: + | 1701 | 345 | 39.24 | 5.15 | −0.3 | AtSRK2E; OsSAPK1 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.14 | Glyma08g20090 | Chr08:15173104–15177102: − | 1959 | 352 | 40.26 | 6.1 | −0.486 | AtSRK2B; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.15 | Glyma08g00770 (SPK3) | Chr08:400210–404391: − | 2076 | 351 | 40.39 | 5.75 | −0.529 | AtSRK2A; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.16 | Glyma11g04150 (SPK2) | Chr11:2759687–2763609: − | 1585 | 339 | 38.66 | 6.39 | −0.45 | AtSRK2E; OsSAPK3 | IPR017441 (11–34); IPR008271 (120–132) |
| GmSnRK2.17 | Glyma11g06250 | Chr11:4436484–4443383: + | 2211 | 359 | 40.78 | 4.68 | −0.234 | AtSRK2I; OsSAPK10 | IPR017441 (27–50); IPR008271 (136–148) |
| GmSnRK2.18 | Glyma12g29130 | Chr12:32505082–32508220: + | 1719 | 359 | 41.08 | 5.82 | −0.537 | AtSRK2B; OsSAPK7 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.19 | Glyma14g35380 | Chr14:44313521–44317470: − | 1831 | 338 | 38.18 | 5.38 | −0.251 | AtSRK2C; OsSAPK1 | IPR017441 (10–33); IPR008271 (119–131) |
| GmSnRK2.20 | Glyma17g15860 | Chr17:12585658–12589679: − | 1405 | 336 | 38.04 | 5.71 | −0.46 | AtSRK2E; OsSAPK3 | IPR017441 (11–34); IPR008271 (120–132) |
| GmSnRK2.21 | Glyma17g20610 | Chr17:19751156–19756370: + | 1796 | 360 | 40.91 | 4.75 | −0.273 | AtSRK2I; OsSAPK10 | IPR017441 (29–52); IPR008271 (138–150) |
| GmSnRK2.22 | Glyma20g01240 | Chr20:846957–851473: − | 2064 | 364 | 41.49 | 4.89 | −0.344 | AtSRK2E; OsSAPK10 | IPR017441 (29–52); IPR008271 (138–150) |
1 Chromosome:start position–end position: strand, (–) means antisense strand of chromosome; (+) means positive-sense strand of chromosome. 2 Protein kinase, adenosine triphosphate (ATP) binding site (IPR017441); Serine/threonine-protein kinase, active site (IPR008271). bp: base pair; aa: amino acid.