Table 2. Strains of polyhydrolytic aerobic haloalkaliphilic bacteria, isolated from soda solonchak soils.
Candidate new species are highlighted in bold (<97% 16S rRNA gene sequence identity). “ +” and “ −” presence or absence of the feature.
| Isolate code | Source | Colony morphology | Phylogeny | |||
|---|---|---|---|---|---|---|
| Sample code | Mycelium | Pigment aerial/substrate | Endo-spores | Closest relative | % similarity | |
| Actinobacteria | ||||||
| DS1 | KUS | + | − | − | Streptomyces sodiiphilus (haloalkaliphile) | 97 |
| DS7 | BS | + | Gray | − | Streptomyces sodiiphilus (haloalkaliphile) | 97 |
| DS8 | BS | + | − | − | Streptomyces sodiiphilus (haloalkaliphile) | 97 |
| DS9 | BS | + | Gray | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS16 | KT | + | − | − | Streptomyces alkalithermotolerans (haloalkaliphile) | 98 |
| DS31 | EWN | + | Gray | − | Streptomyces sp. E-070 (haloalkaliphile) | 99 |
| DS32 | EWN | + | − | − | Streptomyces sp. E-070 (haloalkaliphile) | 99 |
| DS34 | MLC | + | Gray | − | Streptomyces sp. YIM 80244 (haloalkaliphile) | 97 |
| DS35 | MLC | + | Beige | − | Streptomyces sp. E-070 (alkaliphile) | 99 |
| DS36 | KS | + | Gray | − | Streptomyces sodiiphilus YIM 80305 (haloalkaliphile) | 99 |
| DS37 | KS | + | Gray | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS39 | KS | + | -/brown | − | Streptomyces sp. E-070 (haloalkaliphile) | 99 |
| DS42 | KS | + | Beige | − | Streptomyces alkalithermotolerans (haloalkaliphile) | 97 |
| DS43 | KS | + | Beige | − | Streptomyces sodiiphilus | 99 |
| DS46 | KS | + | Gray | − | Streptomyces sp. E-070 (haloalkaliphile) | 99 |
| DS55 | AA | + | − | − | Streptomyces sodiiphilus (haloalkaliphile) | 97 |
| DS58 | KS | + | − | − | Streptomyces sodiiphilus YIM 80305 (haloalkaliphile) | 97 |
| DS59 | KS | + | − | − | Streptomyces sodiiphilus YIM 80305 (haloalkaliphile) | 97 |
| DS61 | KS | + | Beige | − | Streptomyces sunnurensis | 98 |
| DS65 | AA | + | Gray | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS70 | AA | + | − | − | Streptomyces alkalithermophilus (alkaliphile) | 97 |
| DS71 | AA | + | Gray/red | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS177 | KS | − | Gray/viol | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS182 | KT | + | Olive | − | Streptomyces alkaliphilus (haloalkaliphile) | 99 |
| DS183 | KT | + | − | − | Streptomyces sp. E-070 (haloalkaliphile) | 97 |
| DS2 | KUS | + | − | − | Nocardiopsis exhalans VTT E-063001 | 99 |
| DS3 | KUS | + | − | − | Nocardiopsis sp. YIM 80251 (haloalkaliphile) | 99 |
| DS4 | KUS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS10 | BS | + | − | − | Nocardiopsis exhalans VTT E-063001 | 99 |
| DS12 | KT | + | − | − | Nocardiopsis sp. YIM 80129 (haloalkaliphile) | 99 |
| DS13 | KUS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS14 | KT | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS15 | KT | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS17 | MS | + | Beige | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS18 | MS | + | Beige | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS19 | MS | + | Gray | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS21 | MS | + | Olive | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS22 | MS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS23 | MS | + | Beige | − | Nocardiopsis sp. YIM 80251 (haloalkaliphile) | 99 |
| DS24 | MS | + | Beige | − | Nocardiopsis sp. YIM 80251 (haloalkaliphile) | 99 |
| DS25 | MS | + | Beige | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS26 | MS | + | Beige | − | Nocardiopsis sp. YIM 80133 (haloalkaliphile) | 99 |
| DS27 | MS | + | Beige | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS28 | MS | + | -/brown | − | Nocardiopsis sp. YIM 80133 (haloalkaliphile) | 99 |
| DS29 | MS | + | − | − | Nocardiopsis sp. YIM 80133 (haloalkaliphile) | 99 |
| DS30 | MS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS38 | KS | + | Beige/red | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS40 | KS | + | Beige | − | Nocardiopsis sp. YIM 80129 (haloalkaliphile) | 99 |
| DS41 | KS | + | Beige | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS44 | KS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS45 | KS | + | − | − | Nocardiopsis sp. YIM 80129 (haloalkaliphile) | 100 |
| DS47 | AA | + | − | − | Nocardiopsis alba | 99 |
| DS48 | AA | + | − | − | Nocardiopsis alba | 98 |
| DS49 | AA | + | − | − | Nocardiopsis sinuspersici | 99 |
| DS50 | AA | + | − | − | Nocardiopsis sp. YIM 80133 (haloalkaliphile) | 99 |
| DS51 | AA | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS53 | AA | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS54 | AA | + | -/red | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS56 | AA | + | − | − | Nocardiopsis alba | 99 |
| DS57 | KS | + | Beige | − | Nocardiopsis sp. YIM 80133 (haloalkaliphile) | 99 |
| DS62 | KS | + | Olive | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS63 | AA | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS64 | AA | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS66 | AA | + | − | − | Nocardiopsis sp. YIM 80130 (haloalkaliphile) | 99 |
| DS67 | AA | + | − | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS68 | AA | + | − | − | Nocardiopsis sp. YIM 80130 (haloalkaliphile) | 99 |
| DS69 | AA | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS73 | KUS | + | − | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS74 | KUS | + | − | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS75 | KUS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS76 | KUS | + | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS78 | KUS | + | − | − | Nocardiopsis sp. YIM 80130 (haloalkaliphile) | 99 |
| DS79 | KUS | + | − | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS174 | KS | − | -/red | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 | |
| DS175 | KS | − | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS176 | KS | − | − | − | Nocardiopsis sp. E-143 (haloalkaliphile) | 99 |
| DS178 | KS | − | − | − | Nocardiopsis sp. YIM 80034 (haloalkaliphile) | 100 |
| DS180 | KUS | + | Reddish | − | Nocardiopsis ganjiahuensis (haloalkaliphile) | 100 |
| DS181 | KUS | + | − | − | Nocardiopsis sp. AACh2 (haloalkaliphile) | 99 |
| DS20 | MS | + | − | − | Glycomycetaceae(halophiles) | 92 |
| DS33 | EWN | + | Pink | − | Salinispora arenicola NPS11684 | 94 |
| DS60 | KS | + | − | − | Isoptericola halotolerans | 99 |
| DS82 | KT | − | Yellow | + | Isoptericola halotolerans | 99 |
| DS88 | KS | − | Yellow | − | Isoptericola halotolerans | 99 |
| DS91 | KT | − | Yellow | − | Isoptericola halotolerans | 99 |
| DS92 | KT | − | Yellow | − | Isoptericola halotolerans | 99 |
| DS97 | MS | − | Yellow | − | Isoptericola halotolerans | 99 |
| DS99 | MS | − | − | − | Isoptericola halotolerans | 99 |
| DS111 | MS | − | Yellow | − | Isoptericola halotolerans | 98 |
| DS164 | KS | − | Yellow | − | Isoptericola halotolerans | 99 |
| DS149 | MS | − | Orange | − | Nesterenkonia xinjiangensis | 100 |
| DS11 | KUS | − | − | − | Nitriliruptor alkaliphilus (haloalkaliphile) | 98 |
| Bacilli | ||||||
| DS6 | BS | + | − | + | Bacillus horikoshii (alkaliphile) | 100 |
| DS72 | KUS | − | − | + | Bacillus sp. E-141 (haloalkaliphile) | 99 |
| DS81 | KT | − | − | + | Bacillus okhensis (haloalkalitolerant) | 99 |
| DS83 | KT | − | − | + | Bacillus sp. ABCh1 (haloalkaliphile) | 98 |
| DS84 | KT | − | Yellow | + | Bacillus cellulolyticus (alkaliphile) | 99 |
| DS85 | KT | − | − | + | Bacillus cellulolyticus (alkaliphile) | 99 |
| DS86 | KT | − | Cream | + | Bacillus pseudofirmus ( alkaliphile) | 100 |
| DS87 | KT | − | − | + | Bacillus polygoni (haloalkaliphile) | 99 |
| DS89 | KS | − | − | + | Bacillus daliensis (haloalkaliphile) | 99 |
| DS90 | KT | − | − | + | Bacillus halodurans ( haloalkalitolerant) | 100 |
| DS93 | KT | − | − | + | Bacillus cellulolyticus (alkaliphile) | 100 |
| DS94 | KT | − | − | + | Bacillus vedderi (alkaliphile) | 98 |
| DS95 | KT | − | − | + | Bacillus akibai (alkaliphile) | 98 |
| DS96 | MS | − | Orange | − | Bacillus halodurans (haloalkaliphile) | 99 |
| DS100 | MS | − | Orange | + | Bacillus daliensis (haloalkaliphile) | 98 |
| DS101 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS102 | MS | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 98 |
| DS103 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS104 | MS | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 98 |
| DS105 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS106 | MS | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 98 |
| DS107 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS108 | MS | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 98 |
| DS109 | MS | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 98 |
| DS110 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS112 | MS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS113 | KS | − | Orange | − | Bacillus daliensis (haloalkaliphile) | 99 |
| DS114 | KT | − | − | + | Bacillus bogoriensis (haloalkaliphile) | 97 |
| DS116 | KT | − | − | + | Bacillus sp. Z24-11 (haloalkaliphile) | 100 |
| DS118 | KT | − | − | + | Bacillus polygoni (alkaliphile) | 99 |
| DS119 | KT | − | − | + | Bacillus pseudofirmus (alkaliphile) | 100 |
| DS120 | KT | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS121 | KT | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS122 | KT | − | Cream | + | Bacillus pseudofirmus (alkaliphile) | 98 |
| DS126 | BS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS127 | BS | − | Orange | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS128 | BS | − | Orange | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS129 | BS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS131 | BS | − | Orange | − | Bacillus pseudofirmus (alkaliphile) | 100 |
| DS132 | KT | − | Cream | + | Bacillus polygoni (haloalkaliphile) | 99 |
| DS133 | KT | − | − | + | Bacillus halodurans (haloalkaliphile) | 100 |
| DS134 | KT | − | Cream | + | Bacillus clarkii (alkaliphile) | 99 |
| DS135 | KT | − | − | + | Bacillus polygoni (haloalkaliphile) | 99 |
| DS136 | KT | − | Cream | + | Bacillus sp. Z24-11 (haloalkaliphile) | 99 |
| DS137 | KT | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS138 | KT | − | − | + | Bacillus sp. Z24-11 (haloalkaliphile) | 99 |
| DS139 | KT | − | − | + | Bacillus polygoni (haloalkaliphile) | 100 |
| DS140 | KT | − | − | + | Bacillus alkalisediminis (haloalkaliphile) | 99 |
| DS141 | KT | − | Yellow | + | Bacillus alkalinitrilicus (haloalkaliphile) | 99 |
| DS142 | KT | − | − | + | Bacillus alkalinitrilicus (haloalkaliphile) | 99 |
| DS143 | KT | − | − | + | Bacillus mannanilyticus (alkaliphile) | 96 |
| DS144 | MS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS148 | MS | − | − | + | Bacillus alkalinitrilicus (haloalkaliphile) | 99 |
| DS150 | MS | − | Orange | + | Bacillus daliensis (haloalkaliphile) | 98 |
| DS151 | MS | − | − | + | Bacillus halodurans (haloalkaliphile) | 100 |
| DS152 | MS | − | − | + | Bacillus horikoshii (alkaliphile) | 99 |
| DS153 | MS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS155 | MS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS158 | MS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS159 | MS | − | − | + | Bacillus akibai (alkaliphile) | 99 |
| DS160 | KS | − | Yellow | + | Bacillus horikoshii (alkaliphile) | 99 |
| DS161 | KS | − | − | + | Bacillus horikoshii (alkaliphile) | 99 |
| DS163 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 100 |
| DS165 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS166 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS168 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS169 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS172 | KS | − | − | + | Bacillus pseudofirmus (alkaliphile) | 99 |
| DS184 | KT | − | − | + | Bacillus halodurans (haloalkaliphile) | 100 |
| DS117 | KT | − | Orange | − | Anaerobacillus alkalidiazotrophicus (haloalkaliphile) | 97 |
| DS123 | KT | − | − | + | Anaerobacillus alkalidiazotrophicus (haloalkaliphile) | 97 |
| Gammaproteobacteria | ||||||
| DS115 | KUS | − | − | − | Alkalimonas amylolytica (haloalkaliphile) | 99 |
| DS125 | BS | − | − | − | Alkalimonas collagenimarina (haloalkaliphile) | 99 |
| DS130 | BS | − | − | − | Alkalimonas amylolytica (haloalkaliphile) | 99 |
| DS154 | MS | − | Greenish | − | Alkalimonas amylolytica (haloalkaliphile) | 99 |
| DS124 | BS | − | − | − | Aliidiomarina maris | 99 |
| DS145 | MS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 99 |
| DS146 | MS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 99 |
| DS156 | MS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 99 |
| DS157 | MS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 99 |
| DS167 | KS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 99 |
| DS179 | KS | − | − | − | Aliidiomarina soli (haloalkaliphile) | 98 |
| DS162 | KS | − | Yellow | − |
Xanthomonadaceae ML-122 (haloalkaliphile) Rehaibacterium terrae |
97 95 |
| DS170 | KS | − | − | − | Xanthomonadaceae ML-122 (haloalkaliphile) | 99 |
| DS171 | KS | − | − | − | Lysobacterspp. | 96 |
| DS173 | KS | − | Yellow | − |
Xanthomonadaceae ML-122 (haloalkaliphile) Lysobacterspp. |
99 95 |
| DS147 | MS | − | − | − |
Xanthomonadaceae ML-122 (haloalkaliphile) Lysobacterspp. |
99 95 |