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. 2017 Sep 28;12(9):e0182455. doi: 10.1371/journal.pone.0182455

Table 1. Description of cell-specific models based on cell lineage from Fig 1.

Each candidate model corresponds to a partition of cell types into non-overlapping groups. Cell types within each set of parentheses, {}, belong to the same partition and were assumed to have the same level of methylation. For each cell-specific model excluding ‘All’, the partition annotated by an asterisk (*) denotes the reference partition.

Candidate Model Differentially methylated cell type(s) Partition
Lymphocyte-I All Lymphocytes {CD19+},{CD4+},{CD8+},{CD56+},{CD14+,CD16+}*
Lymphocyte-II Lymphocytes excl. CD19+ B cells {CD4+},{CD8+},{CD56+},{CD19+,CD14+,CD16+}*
Myeloid All Myeloids {CD14+},{CD16+},{CD19+,CD4+,CD8+,CD56+}*
Pan T T cells {CD4+},{CD8+},{CD19+,CD56+,CD14+,CD16+}*
CD19+ B CD19+ B cells {CD19+},{CD4+,CD8+,CD56+,CD14+,CD16+}*
CD4+ T CD4+ T cells {CD4+},{CD19+,CD8+,CD56+,CD14+,CD16+}*
CD8+ T CD8+ T cells {CD8+},{CD19+,CD4+,CD56+,CD14+,CD16+}*
CD56+ NK CD56+ Natural Killers {CD56+},{CD19+,CD4+,CD8+,CD14+,CD16+}*
CD14+ Mono CD14+ Monocytes {CD14+},{CD19+,CD4+,CD8+,CD56+,CD16+}*
CD16+ Neu CD16+ Neutrophils {CD16+},{CD19+,CD4+,CD8+,CD56+,CD14+}*
All All available cell types {CD19+},{CD4+},{CD8+},{CD56+},{CD14+},{CD16+}
Null None {CD19+,CD4+,CD8+,CD56+,CD14+,CD16+}