Table 2.
Upregulated description of process | −log10 (p-value) | Downregulated description of process | −log10 (p-value) | |
2 Gy Fe ions Day 1 | Signal transduction by p53 class mediator | 11 | Cell cycle process | 99 |
DNA damage response, signal transduction by p53 class mediator | 7 | Chromosome organization | 67 | |
Positive regulation of cell cycle arrest | 7 | Cell division | 49 | |
Response to radiation | 7 | DNA metabolic process | 49 | |
Signal transduction in response to DNA damage | 7 | DNA replication | 43 | |
Response to abiotic stimulus | 7 | Cellular component organization or biogenesis | 38 | |
Regulation of cell proliferation | 7 | Chromosome segregation | 26 | |
Regulation of apoptotic process | 6 | Microtubule-based process | 19 | |
Response to stimulus | 6 | Regulation of chromosome segregation | 18 | |
Chondroblast differentiation | 5 | Negative regulation of gene expression, epigenetic | 17 | |
2 Gy Fe ions Day 7 | Developmental process | 8 | Regulation of endothelial cell migration | 10 |
Negative regulation of response to stimulus | 8 | Negative regulation of nucleic acid-templated transcription | 10 | |
Regulation of locomotion | 7 | Regulation of signal transduction | 9 | |
Regulation of cell proliferation | 7 | Developmental process | 8 | |
Locomotion | 7 | Cytoskeleton organization | 7 | |
Single-organism process | 7 | Response to endogenous stimulus | 6 | |
Positive regulation of biological process | 7 | Regulation of cell death | 6 | |
Single-organism developmental process | 7 | Regulation of cell cycle | 6 | |
Regulation of multicellular organismal process | 7 | Regulation of cell proliferation | 6 | |
Regulation of protein metabolic process | 7 | Cell adhesion | 6 |
Gene ontology enrichment analysis (process) was performed on differentially expressed genes in irradiated vs. sham-irradiated ECs (n = 3). Table shows the top 10 GO enrichment terms among upregulated (left) and downregulated (right) differentially expressed genes on day 1 (top) or day 7 after 2 Gy of Fe ions (bottom).